Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1653 |
Symbol | alaS |
ID | 4709710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1805500 |
End bp | 1808091 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639856120 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001003219 |
Protein GI | 121998432 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.149949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCGG CGCAGTTGCG CGCCGCCTTC CTGGACTTCT TCAGGGAGCG GGGGCACGAG GTCGTGCCGA GTTCGCCGTT GGTGCCGGCC AACGACCCGA CGCTGCTCTT TACCAACGCC GGGATGGTCC CGTTCAAAGA GGTCTTCCTG GGGCGGGAGC AGCGCGGCTA CCAGCGGGCC ACCAGTAGCC AGCGCTGCGT GCGCGCCGGC GGTAAGCACA ACGACCTGGA GAACGTCGGC TACACGGCCC GGCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCTCTTT CGGCGACTAC TTCAAGCGGG ATGCCATCCG CTACGCCTGG TCGTTCTTGA CCGAGGTGGT GGAGCTTCCG CCCGAACGGC TCTGGGTGAC GGTCTACGAG GATGACGACG AGGCCGCGCA GATCTGGCTG GAAGAGATTG GCGTGGATCC GGCGCGGTTC CGCCGGATCG GTGCCCACGA CAATTTCTGG TCCATGGGGG ATACCGGGCC GTGCGGGCCG TGCTCGGAGG TCTTCTACGA CCACGGTCCC GAGGTGCCGG GCGGGCCGCC GGGTTCCGAT GAAGAGGATG GTGACCGGTA CATCGAGGTC TGGAACCTGG TGTTCATGCA GTACGACCGC GATGCCGAGG GCAACCTGAA CCCGCTGCCG AGTCCTTCCA TCGACACCGG GATGGGCCTG GAGCGCCTGG CCGCGGTCCT GCAGGGCGTC CACGACAATT TCGAGACGGA CCTGTTCACC CCGCTGATCG ATGCCGCCGG CGAGATCGCC GGGGTCAGCG ATCGGCGCAA GCCCTCGCTC AAGGTAGTTG CCGACCATAT CCGCGCTTGT TCGTTCCTGA TCGTTGATGG GGTGTTGCCC TCGACGGAGG GGCGCGGGTA CGTGTTGCGC CGGATCATCC GGCGGGCGGT ACGCCACGGA TATCAGTTGG GCATCGATGA GCCGTTCTTC TACCGCCTGG TCGATCCGCT CGATGCGGTC ATGGGCGAGG CATTCCCGGA GCTGCGTGAC CGCCGTGAAT TCGTCGAAAA GATCCTCTTC CAGGAGGAGA AGCGGTTCCG CGAGACGCTG GAAGACGGAC TCGCGCTGCT TGACGAGTAC CTCGGCGGGA ACGACAGCGG GGTGATCGAT GGCGAGGTGG TGTTCAAGCT CTACGATACC CATGGCTTCC CGGTGGACCT GACCGCGGAT ATCGCCCGCG AGCGCAACCT TGAGGTGGAC TATCAGGGCT TCGAGGCGCG CATGGCCGAG CAACGGGAGC GCGCGCGCGC GGCTAGCCGG TTTGGCGGGG CGCGTGAGGA AGTGGTTGAC GCGGGCGAGA GCCGCTTCAC CGGCTACGAG ACCCTCGAGG ATGTCGGCTC GGTGATCGGG CTGTATCAGG ACGGCCGCTC GGTACAGCGG TTGCAGCCCG GCGAAGAGGG GATGGTGGTC CTCGACCGGA CTCCGTTCTA CGCCGAGTCG GGTGGTCAGG TGGGCGATCG CGGCGAAATC CTCGCCAACG GTCTACGCTT CCGGGTAGCG GACACCGTGA AGCAGGGCGA GGCCCATGGT CACCTGGGGC GTCTGGAATC GGGCGAGCTG GGTGTCGGCG ATCAGGTTAC CGCGCGGGTG GATCGTGGCA CCCGCGAGGC AACGGTCCGC AACCACTCCG CCACGCACCT GCTGCACGCC GCGCTGCGCG AGATCCTGGG GGATCATGTT CAGCAGAAGG GATCCCTGGT GGCGCCGGAT CGCCTGCGTT TCGACTTCTC CCACTACGAG GCGCCGTCGC GGGAAGACCT GGAACGGATC GAGGCGCGCG TGAATCAGGA GATCCTCACC AATCACCCCG TCGAGGCGGC GCACATGGCC TACGAAGAAG CAGTCCAGGT CGGAGCTATG GCGTTGTTCG GCGAGAAGTA CGGGGATACG GTGCGGGTGA TCTCCCTGGG GGACTATTCC CAGGAGCTCT GTGGTGGCAC CCACGCCGCC CGGACTGGGG ACATCGGGTT GTTCAAAATC ATCGACGAGA CGGGTGTGGC CGGCGGCGTG CGGCGCATCG AAGCGATCAC TGGTGAGCGG GCCATCGGCT GGGTCCAAGA GGCGGAAGGG CGGTTGAATC GGTTGGCAGA TCTCCTGCGT GTCGGGCCGG ACAACCTGGT GATGAAGGTC GAGCAGCTCA GCGAGCGCAC CCGCGAGCAG GAGAAAGAGA TTGAGCGCCT CAAGCAGAAG CTCGCTACGC AGGCCGGGCG TTCGCTGTTG GATGATGCCG GTGAGGTTGC CGGTGTCCGC TTCTTGGCCA CCTGCGTTGA AGGGGGTGGC AAGGGGTTGC GGGATACCCT GGATCAGCTC AAGAACCAAC TCGGCAGTGG CGTGATCGTG CTGGCGGCGG TTCAGGGCGA AAAGGTCCAG CTGGTAGCGG GTGTAACCAA GGATCTGACC GATCGATTGG CCGCCGGCGA TCTGGTCAAT CATGTCGCCG CCCAGGTTGG GGGGCGCGGC GGAGGGCGGG CGGACTTCGC CCAGGCAGGG GGTAAAGACC CAAGCCACGT CAATGATGCG TTGGCTTCAG TCGAAGCTTG GATTAAGGAT AACTTGACTT AA
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Protein sequence | MTSAQLRAAF LDFFRERGHE VVPSSPLVPA NDPTLLFTNA GMVPFKEVFL GREQRGYQRA TSSQRCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIRYAW SFLTEVVELP PERLWVTVYE DDDEAAQIWL EEIGVDPARF RRIGAHDNFW SMGDTGPCGP CSEVFYDHGP EVPGGPPGSD EEDGDRYIEV WNLVFMQYDR DAEGNLNPLP SPSIDTGMGL ERLAAVLQGV HDNFETDLFT PLIDAAGEIA GVSDRRKPSL KVVADHIRAC SFLIVDGVLP STEGRGYVLR RIIRRAVRHG YQLGIDEPFF YRLVDPLDAV MGEAFPELRD RREFVEKILF QEEKRFRETL EDGLALLDEY LGGNDSGVID GEVVFKLYDT HGFPVDLTAD IARERNLEVD YQGFEARMAE QRERARAASR FGGAREEVVD AGESRFTGYE TLEDVGSVIG LYQDGRSVQR LQPGEEGMVV LDRTPFYAES GGQVGDRGEI LANGLRFRVA DTVKQGEAHG HLGRLESGEL GVGDQVTARV DRGTREATVR NHSATHLLHA ALREILGDHV QQKGSLVAPD RLRFDFSHYE APSREDLERI EARVNQEILT NHPVEAAHMA YEEAVQVGAM ALFGEKYGDT VRVISLGDYS QELCGGTHAA RTGDIGLFKI IDETGVAGGV RRIEAITGER AIGWVQEAEG RLNRLADLLR VGPDNLVMKV EQLSERTREQ EKEIERLKQK LATQAGRSLL DDAGEVAGVR FLATCVEGGG KGLRDTLDQL KNQLGSGVIV LAAVQGEKVQ LVAGVTKDLT DRLAAGDLVN HVAAQVGGRG GGRADFAQAG GKDPSHVNDA LASVEAWIKD NLT
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