Gene Hhal_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1644 
Symbol 
ID4709924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1795799 
End bp1796362 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID639856109 
ProductLipocalin family protein 
Protein accessionYP_001003210 
Protein GI121998423 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGCG CAGCGAGGAT GTTCCCGGGC ATCCGGGTGG CGCTTCTGGC CACCGCGGGA 
GGGCTGATGC TCGCGGGTTG CACCGGGGCG CCCTCGGGGG TCGACCCCGT GGAGGGGTTC
GACGCGGATC GTTATATGGG CGAGTGGTAT TCAGTCAAGC GCCTCGATCA TCGCTTTGAG
CGCGGGCTGA CCGATGTCAG CGCGGAGTAC TGGAGCCGGG AAGACGGACG GGTCGGGGTG
CGTAATCACG GCTACGATCC GGACGCCGGT GAGTGGCAGG AGATCGAGGG GACGGCCCGG
TTCCAGGGGG AGCCGGAAGT GGCCAGTCTT ACAGTGACCT TCACGTGGCC CATTCGCGGC
GGTTACCACG TCATCGCTCT GGATGAGGCT GAGTATCAGT GGGCGATGGT CTCTGGCCCG
ACGCGCGGGT ACCTGTGGAT CCTCTCCCGA GAGCCGGATC TTGAGCAGGT GGTCCTGGAC
GACCTGATCC AGAAGGCCGG AGCGCTCGGC TTCGAGGTCG AAGAGCTGCA GCGCGTCGAG
CACGGGGTGG CGCCATCAAG GTGA
 
Protein sequence
MTGAARMFPG IRVALLATAG GLMLAGCTGA PSGVDPVEGF DADRYMGEWY SVKRLDHRFE 
RGLTDVSAEY WSREDGRVGV RNHGYDPDAG EWQEIEGTAR FQGEPEVASL TVTFTWPIRG
GYHVIALDEA EYQWAMVSGP TRGYLWILSR EPDLEQVVLD DLIQKAGALG FEVEELQRVE
HGVAPSR