Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1642 |
Symbol | |
ID | 4709914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1792316 |
End bp | 1793680 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639856107 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_001003208 |
Protein GI | 121998421 |
COG category | [R] General function prediction only |
COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.890772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA CCGTCAAGTA TGTCCTCGAT GAGGCGCGGA TCCCGCGCGC CTGGTACAAC ATCAGCGCCG ATCTGCCCGC CCCGCTGGCG CCGGTGCTCC ACCCGGCAAC CCGGGAGCCG GTTTCGGCGG ACGACCTGGC GCCGCTCTTC CCGCGCGGAG TGATTGAGCA GGAGCTGACT ACGGAGCGGG AGGTCGAGAT CCCGGAGCCG GTTCGCAACG CCTATCGGCA GTGGCGGCCG GCGCCGCTTT ACCGGGCCCG GCGCCTGGAG AAGGCCCTCG ATACCCCGGC GCGCATCTAT TACAAGTACG AGGGCGTCAG CCCGGCCGGG AGTCACAAGC CGAATACCGC GCTCCCGCAG GCCTTCTACA ACCACGCCGA GGGGGTGCGC CGCATCACCA CCGAGACTGG GGCCGGTCAG TGGGGGTCGT CCCTGGCGCT GGCCGGCGCC ATGTTCGATC TCGACATCGA GGTCTTCATG GTGGGGGTCA GTTATAAGCA GAAACCCTAC CGGCGTGCGT TCATGGAGAG CTTCGGTGCG CGGTGCATTG CCAGCCCGAG CCAAGAGACC GCCTTTGGCC GCTCGGTCTT GGCGGACAAC CCGGCCAGCA CCGGGAGTCT GGGCATCGCC ATCGGCGAGG CGGTGGAGCT GGCCGCGCAG CGCGACGACA CCAAGTACGC GCTGGGCAGC GTGCTCAACC ACGTCCTGCT ACATCAGACC GTGACGGGTG TCGAGGCGAT GGAGCAGATG GCCATGGCCG ACGATTACCC CGACACGGTC ATTGCCTGTA CCGGGGGTGG CAGCAACTTC GCGGGGATCG TTTTCCCGTT CCTCGGCGCC GCCCTGCGCG GCGGCCCGAG CGTCGAGGCC ATCGCCGTGG AGCCGCTGGC CTGTCCGACC CTAACCCGGG GGCAGTTTGC CTACGATTAC GGTGACTCGG CGCAGTTGAC GCCGCTGACC AAGATGCACA CCCTTGGCTC CGGTTTCATG CCCCCGGGGT TTCACGCCGG GGGGCTGCGT TACCACGGCA TGGCCCCCCA GATCAGCCAT TTGAAGGACC TCGGCTACCT CGACGCGCGG GCCTACGATC AGCTCGACTG CTTTGCTGCC GGTCTGGAAT TTGCGCGGGC CGAGGGCATC ATCCCCGCCC CCGAGGCCAA TCACGCGGTC AAGGCGGTGA TCGAGGAGGC CCAGGGGTGC CGCGAACGTG GCGAGTCGAA GGCGATCCTG TTCAACCTTT GCGGCCACGG TAATTTTGAC ATGCAGGCCT ATACGGATTA CCTGGCGGGC AACCTCAGCG ACCTCGGCGG CAGCCAGGTC GAGGCGGCCA TGGCGCTGTC CGGACTGCCG TCGGTGGAGC GTTGA
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Protein sequence | MSETVKYVLD EARIPRAWYN ISADLPAPLA PVLHPATREP VSADDLAPLF PRGVIEQELT TEREVEIPEP VRNAYRQWRP APLYRARRLE KALDTPARIY YKYEGVSPAG SHKPNTALPQ AFYNHAEGVR RITTETGAGQ WGSSLALAGA MFDLDIEVFM VGVSYKQKPY RRAFMESFGA RCIASPSQET AFGRSVLADN PASTGSLGIA IGEAVELAAQ RDDTKYALGS VLNHVLLHQT VTGVEAMEQM AMADDYPDTV IACTGGGSNF AGIVFPFLGA ALRGGPSVEA IAVEPLACPT LTRGQFAYDY GDSAQLTPLT KMHTLGSGFM PPGFHAGGLR YHGMAPQISH LKDLGYLDAR AYDQLDCFAA GLEFARAEGI IPAPEANHAV KAVIEEAQGC RERGESKAIL FNLCGHGNFD MQAYTDYLAG NLSDLGGSQV EAAMALSGLP SVER
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