Gene Hhal_1639 details

Gene Information

• Locus tag: Hhal_1639
• ID: 4709635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1789864
• End bp: 1790496
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639856104
• Product: Fis family transcriptional regulator
• Protein accession: YP_001003205
• Protein GI: 121998418
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATCCA TGAACGCCCC GCAACAGTCG CTGAGCGATC TGTCGGCGGA GACGGTCGCA 
CGGCTGCTTG AAGCTGCCGC GGATATCGCA CTGATCGTGG ATACCGAGGG CACGATCCAC 
GACGTGGCGG TCGGCAGCGA CGACCCGGGC GTTCGCGCTG CCGCAGGCTG GAAAGGGCGG 
CGCTGGCGCG AAGTGGTTGG CACCACGGAG CAACAGACCG TCGACCAGCT GCTCATCGAG 
CCAGAGACGG CGCCCGCGGG CACGACGTTG CAGCACATCG ACGCGCGCGG CAACCCGATC 
CCGGTGCGCT ACCGAGTCGT CGCCCTGGAC GGCCAACGAT TCGCTGCGCT GGGCAGGGAT 
CTGCGCCCCT GTGCCGCACT GCGCCAGCAA CCGCGCGAGC ACAACCGGCT GCGTTCCATC 
GAGCAGACCA CGGCCCTGGT CGGCCAGGTC CCGCTGCGTG ACCTGGTCCG TGAAGCCACC 
GACCTGATCG AACGCATGTG TATCGAGACG GCCCTCAGCA TCACCCACGA CAACCGGGCC 
TCTGCCGCCG AACTGCTCGG CCTCAGCCGG CAGAGCCTCT ACTCCAAGCT ACGCCGTCAC 
GGGCTGATGA CCTCCCACAA CGACGCCGAG TAG 

 

Protein sequence

MKSMNAPQQS LSDLSAETVA RLLEAAADIA LIVDTEGTIH DVAVGSDDPG VRAAAGWKGR 
RWREVVGTTE QQTVDQLLIE PETAPAGTTL QHIDARGNPI PVRYRVVALD GQRFAALGRD 
LRPCAALRQQ PREHNRLRSI EQTTALVGQV PLRDLVREAT DLIERMCIET ALSITHDNRA 
SAAELLGLSR QSLYSKLRRH GLMTSHNDAE