| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1635 |
|---|
| Symbol | bchH |
|---|
| ID | 4709629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1782484 |
|---|
| End bp | 1786233 |
|---|
| Gene Length | 3750 bp |
|---|
| Protein Length | 1249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639856100 |
|---|
| Product | magnesium chelatase subunit H |
|---|
| Protein accession | YP_001003201 |
|---|
| Protein GI | 121998414 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.28996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGC CCACTTCAGT CGCTGACCCG ACGCCGGTGC GCGTCGCCAT CATCACGCTG
GACAGCCACA TGGCAGGCGC CGTGGAGCGC GCGCGGCCGG CTCTGCAACG CGATATCCCC
GGCCTGGAGC TGAGCTACCA CGCCGCCTCG GACTGGAACA ACAACCCGGC GGCGCTGGAG
CGTGCCCGGG AGCGGATCGC CTCGGCGGAC ATCATCGTCG CGACGATGCT GTTCATGGAG
GAGCACATCG AGCCCGTGCG CCAGGATCTG GAGGCGCGTC GGGAGGACTG CGATGCGCTG
GTCGGCATCA TGTCGGCTGG CGAGGTGATG AAGCTCACGC GGATGGGCAA GTTCACCATG
GACGGCAGCA CGCGCGGTCC GATGTCCCTG CTCAAAAAGC TGCGCGGGAA GAAGGGCAAG
GCGGAGCAGC AGGACGATGA CGACAGCACC TCGGGGGAGA AGCAGGCTGC AATGCTGCGC
CGCATCCCCC GAATCCTGCG TTTCATCCCC GGCACGGCTC AGGATGTGCG GGCCTACTTC
CTGACCTGGC AGTACTTCCT GGCCAGTTCC GACGAGAACG TCGAGAACAT GGTCCGGTTC
CTCGTGAACC GTTACGCAGC AGGGCCGCGC AGCGGCCTGC GCGGCTCTTT GGAGGTGCAG
GACCCCATCG AGTACCCCGA TGTCGGCGTC TATCACCCCC GCATGGAGCG GCGCATCGGC
GATGACCCCA ACGATCTTCC GGAACCGGAG GGTGGTGCCT CGCGCGGGAC GGTGGGCCTT
CTGCTGATGC GCTCCTATGT GCTCGCCGGC GACTCGGCGC ACTACGACGG CGTCATCGAG
GCCCTGGAAA GCCGGGGGTA TCGTGTCGTC CCGGCATTCG CCAGCGGTCT CGACAACCGT
CCGGCCGTCG AGCGGTTCTT CATGGCGGAC GGTCGTGCCT GCGTCGATGC GGTGATCTCG
CTGACCAGCT TCTCGCTGGT GGGGGGGCCG GCCTACAACA ATTCCGGGGC CGCCGAGCGG
CTGCTGAGAA GGCTCGATGT GCCCTACCTG AATGCCCAGG CCCTGGAGTT CCAGTCCCTG
GAGCAGTGGG AGGGGTCCGA TCGTGGGCTC ACCCCGGTGG AGACGACCAT GATGGTCGCC
ATCCCCGAAC TCGATGGTGC GACCGGGCCG GTGGTCTTCG GCGGCCGTGC CGCGGTGCCT
GGCCCCGACG GGGTGTGCCG GATGGAGGTG CACCCGGAGC GGGCGAAGAT GCTGGCCTCG
CGGGTCGATC GGCTGATCCG TCTGCGGCGC AGCGCGCGCA GCGAGCGCAA GCTGAGCATC
GTGATCTTCA GCTTCCCGCC CGAGGCCGGC GCGCTGGGGT CTGCGGCCTA TCTCTCGGTG
TTCGCCTCGC TCTATAACAC CCTGGTGGAA CTGGACGACG CCGGCTATCG GGTGGAATTG
CCTGAGTCCG TCGATGACCT GCGTGATCGC ATCATCAAGG GCAATGCGGC CAACTACGGT
GCGCACGCCA ACGTGCACCA CCGAGTGACG GTCGACGACT ACGTGGCCCG CGAGCCCTAC
CTCAAGGAGA TCGAGGAGCA GTGGGGGCCG GCGCCGGGCA AGGCGCAGAG CGACGGGCAG
TCCATCCATG TCCTCGGCGC GCAGTTCGGC AACGTCTTCA TCGGCGTGCA GCCGGGCTTC
GGCTACGAGG GCGACCCGAT GCGGCTGCTC TTTGAGAAGG GGCTGACGCC GACCCATGCC
ATGTGCGCCT TCTACCGGTA CATCCGCGAG GATTTCGGGG CGGATGCCGT GCTCCACTTC
GGTACGCACG GCGCCCTGGA GTTCATGCCG GGCAAGCAGT GCGGCATGAG CGCCGGCTGC
TGGCCGGATC GACTGATCGG CGACCTGCCC AACTACTATC TGTACGCGGC CAACAACCCC
TCTGAGGGGT CGATCGCCAA GCGTCGCTCG GCCGCCACGC TGATCAGCTA CCTGACGCCG
CCGGTTGGCA AGGCCGGCCT CTACAAGGGC CTGCTGGAGC TCAAGGCTTC CGTGGAGCGC
TACCGCTCGG CCCCGCCGGA TAACGTGGAG GAGCGCACCG AGCTGGCCCG CCTGATCCAG
GCCCAGGCCG CCGAGGTCGA CCTCGCTGAG CTGGAGCCAG AATGGGGCGA AGAAGAGGCT
GAACAGCGGA TCGCTCAGCT CAGCGAAGAC ATCCTGGAGA TGGAGTACAC CCTCATCCCC
GAGGGGCTCC ATGTGGTTGG GCAGCCCCCG TCCCGCGAGG GCCGGATCGA CCAGCTGGTG
ACCATGGCCG AGACGACCCA CGGAGTGGCG GTGGACCGGG CCTGCGTCGA GGCGCTGGTG
GACGGACACT CGCCTCGCGA GGCCCTGGCC CAGTCCGAGA GCGTCGACCC CGAGATGACC
GAGGAGGCCC TCGAAGGGTT GGCTGATACC GCGCAGAAGC TGGCGGAGAA CCAGGAGCTG
CAGGGCATCA TCCATGCCCT CGACGCCCGT TTCGTGCCTC CGGTCTCGGG CGGCGACCTG
CTGCGGAGTC CGCAGATTCT GCCGACGGGC CGGAACATGC ACGGGTTCGA CCCCTACCGT
CTGCCCAGTG CCTTTGCCGT TCAGGACGGC GCGCGGCAGG CTGAGCGCCT GCTCGACAAG
CACCGCGAAG AGGGGCAGGA ACTGCCCGAC TCGATCGCGA TGGTCCTGTG GGGCACGGAC
AACCTGAAGA GCGAGGGGGC GCCGATCGGT CAGGCCCTCT ACCTCATCGG TGCCCGGCCA
CGCTTCGACA GCTTCGGCAA GCTGGCCGGG GCGGAACTCA TCCCCTTGGA CGAGCTCGGT
CGCAAGCGCA TCGACGTGGT GATCACGCTC TCCGGGATCT TCCGCGATCT ACTGCCGCTG
CAGACCCGGG TGCTGGCTGA GGCGGCCTAC TTGTCCGCGT GCGCCGAGGA TGAGCCGCTG
GAGATGAACC CGATCCGTCG CAACGCCCTG GCGTATCAGG AGAAGCATGG CTGCGACTTC
GAGACCGCGG CGCTGCGGGT TTTCTCTAAC GCCGATGGTG CCTACGGCTC CAACGTTGGC
TCGATGATCG ACCAAGGGGC CTGGGAGGAC GAGGACGAGT TGGCCGATAC CTATACCCGG
CGCAAGTGCT ACGCCTACGG GCGCAGTGGT GAACCGGTGC GTCAGGAGGA GCTGCTCGGC
AGCATGCTCT CCGGCGTCGA GTTGACCTAT CAAAACCTGG AGTCGGTCGA GCTTGGCGTC
ACCACCGTCG ACCACTACTT CGACACGCTC GGCGGCATCA GCCGGGCCGT GGCCCGCTCC
CGGGGCGGCG AGCACGTGCC GGTGTATATC GGCGACCAGA CCCGGGGCGA GGGCAAGGTG
CGGACCCTCT CGGACCAGGT GGCGCTTGAG ACGCGGACCC GGATGCTCAA TCCGAAGTGG
TACGAAGGGC TGCTGGAGCA CGGCTACGAG GGGGTGCACC AGATCGAGGT GCACCTGACC
AACACCATGG GGTGGTCCGC AACCACCGGC CAGGTCCAGC CGTGGGTCTA TCAGCAGTTC
ACGCAGACCT TCATGCTCGA CGACGAAATG CGCGAGCGCA TGGCGCAACT CAACCCGGCG
GCGTCGGCGA AGCTGGCCAA CCGGCTGCTT GAGGCTCACG AGCGCAACTA CTGGAATCCC
GATGAGGAGA CGCTCGAGGC GCTGCGGCGT GCCGGGGACG AGCTCGAGGA TTACTACGAG
GGTGTCAACG AGGAGGAGCA GGCCGCATGA
|
|---|
| Protein sequence | MPKPTSVADP TPVRVAIITL DSHMAGAVER ARPALQRDIP GLELSYHAAS DWNNNPAALE
RARERIASAD IIVATMLFME EHIEPVRQDL EARREDCDAL VGIMSAGEVM KLTRMGKFTM
DGSTRGPMSL LKKLRGKKGK AEQQDDDDST SGEKQAAMLR RIPRILRFIP GTAQDVRAYF
LTWQYFLASS DENVENMVRF LVNRYAAGPR SGLRGSLEVQ DPIEYPDVGV YHPRMERRIG
DDPNDLPEPE GGASRGTVGL LLMRSYVLAG DSAHYDGVIE ALESRGYRVV PAFASGLDNR
PAVERFFMAD GRACVDAVIS LTSFSLVGGP AYNNSGAAER LLRRLDVPYL NAQALEFQSL
EQWEGSDRGL TPVETTMMVA IPELDGATGP VVFGGRAAVP GPDGVCRMEV HPERAKMLAS
RVDRLIRLRR SARSERKLSI VIFSFPPEAG ALGSAAYLSV FASLYNTLVE LDDAGYRVEL
PESVDDLRDR IIKGNAANYG AHANVHHRVT VDDYVAREPY LKEIEEQWGP APGKAQSDGQ
SIHVLGAQFG NVFIGVQPGF GYEGDPMRLL FEKGLTPTHA MCAFYRYIRE DFGADAVLHF
GTHGALEFMP GKQCGMSAGC WPDRLIGDLP NYYLYAANNP SEGSIAKRRS AATLISYLTP
PVGKAGLYKG LLELKASVER YRSAPPDNVE ERTELARLIQ AQAAEVDLAE LEPEWGEEEA
EQRIAQLSED ILEMEYTLIP EGLHVVGQPP SREGRIDQLV TMAETTHGVA VDRACVEALV
DGHSPREALA QSESVDPEMT EEALEGLADT AQKLAENQEL QGIIHALDAR FVPPVSGGDL
LRSPQILPTG RNMHGFDPYR LPSAFAVQDG ARQAERLLDK HREEGQELPD SIAMVLWGTD
NLKSEGAPIG QALYLIGARP RFDSFGKLAG AELIPLDELG RKRIDVVITL SGIFRDLLPL
QTRVLAEAAY LSACAEDEPL EMNPIRRNAL AYQEKHGCDF ETAALRVFSN ADGAYGSNVG
SMIDQGAWED EDELADTYTR RKCYAYGRSG EPVRQEELLG SMLSGVELTY QNLESVELGV
TTVDHYFDTL GGISRAVARS RGGEHVPVYI GDQTRGEGKV RTLSDQVALE TRTRMLNPKW
YEGLLEHGYE GVHQIEVHLT NTMGWSATTG QVQPWVYQQF TQTFMLDDEM RERMAQLNPA
ASAKLANRLL EAHERNYWNP DEETLEALRR AGDELEDYYE GVNEEEQAA
|
|---|
| |