Gene Hhal_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1625 
Symbol 
ID4709668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1772538 
End bp1774214 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content63% 
IMG OID639856090 
Productmagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 
Protein accessionYP_001003191 
Protein GI121998404 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG TCTTCATCCA TCCCAACTAC TCCTCGGGCG GTGCGGAAAT CGCGGGCAAT 
TGGCCCCCGG CATGGGTCGC CTACCTGGCC GGCCACCTTA AACGCGCTGG CTACGACAAC
ATCCGGTTCA TCGACGCGAT GACCAACGAC TTCTCCGACG AGTACATCCG CGAGGAGCTG
GAGAAGGAGA AGCCGGACGT CGTGGCCACC ACCGCGATCA CGCCGTCGAT CTACGTCGCC
GAGCGGAGCC TGGAAATCGC CAAGGAGGTC GACCCCAACG TCGTTACTCT CATTGGCGGC
ATCCACCCGA CCTTCATGTA TAAGCAGGTG CTCAGCGAGG CGCCCTGGAT TGACGCGGTG
GTCCGCGGCG AAGGCGAGGA GATCATGGTC AACCTCGCCC GTGCGATCGA TGAGGGGCGC
TGGCCTAGCG ACCGTGAGTC CATCCTCGGC ATCGCCTACC GCGACGGCGA GCAGATTGTC
GCCACCCCGG CCGCACCGAC GATCAAGGAT CTCGACAGCA TCGAGCCGGA CTGGGGCATT
CTGGAGTGGG AGAAGTACAC CTACATACCG CTCAATACCC GCGTCGCCAT CCCCAACATG
GCCCGCGGCT GCCCGTTCAC CTGCTCCTTC TGCTCGCAGT GGAAATTCTG GCGGGATTAC
CGGATTCGGG ATCCGAAGAA GGTGGTCGAC GAGATTGAGA AGCTCGCCGA CGAGCACGAT
GTCGGTTTCT TCATCCTTGC CGACGAAGAG CCGACCATCA ACCGGAAGAA GTTCATCGAG
TTCTGCCAGG AGCTGATCGA CCGCGGCCTC CCCGATCGCG GCATCCTCTG GGGGATCAAC
ACGCGCGTCA CGGACGTTCT GCGCGACGAA GAGCTCCTCT CCTTCTATCG CAAGGCCGGG
CTGATCCACG TCTCCCTGGG GACTGAGGCG GCTGCGCAGC TCAAGCTCGA CCGCTTCAAC
AAGGAGACGA CCGTCGCCCA GAACAAGAAG GCGATCGAGC TCCTGCGCAA CGCGGGCATC
GTGGTCGAGG CCCAGTTCAT CGTCGGCCTG GAGAACGAGA CCGCCGAGAC GCTTGAAGAG
ACCTACCAGA TGGCCCAGGA CTGGAAACCG GACCTCGCCA ACTGGGCCAT GTATACCCCG
TGGCCGTTCT CCGATCTGTT CCGGGAGCTC AAGGACACCG TCGAGGTCTA CGACTTCGAG
AAGTACAACT TTGTCACCCC CATCATCAAG CCGCAGGCGA TGGACCGGGG CGAGCTGCTC
GATCGCACCA TGAGCAATTA CCGGCGCTTC TACATGCGCA AGGCCCTCTT CTCCTACCCC
TGGGCGGGCA CCGGCGATCG ACGCAAGTAC CTGTTCGGGT GTCTCAAGGC GTTCCTGAAG
GCCGGCTTCC AGCGCAAGTT CTACGACTTG GGCAAGCACG GGTACTGGGG GCCGCAGACC
CGCAAGAAGG TCAGCGAGAA CATCGAGAAG AGCTTCGACA AATCGCGCAC GCTCTCCGAG
GCCCAGCGGG CGGAGTACGA GGAGCAGGCC TCCAAGGAAG AGATCAAGGC CGCCCGGTCG
CATAAGGCCG GTACCGAGAC CGAGCGCACT CCGACCGAGG CACCTGTGCA GGTCCACCGA
GACGGGGTCC CTGGCAAGGG CAAGCAGCAG AAGGCTGCCG AGACCGACGA AGTCTGA
 
Protein sequence
MRIVFIHPNY SSGGAEIAGN WPPAWVAYLA GHLKRAGYDN IRFIDAMTND FSDEYIREEL 
EKEKPDVVAT TAITPSIYVA ERSLEIAKEV DPNVVTLIGG IHPTFMYKQV LSEAPWIDAV
VRGEGEEIMV NLARAIDEGR WPSDRESILG IAYRDGEQIV ATPAAPTIKD LDSIEPDWGI
LEWEKYTYIP LNTRVAIPNM ARGCPFTCSF CSQWKFWRDY RIRDPKKVVD EIEKLADEHD
VGFFILADEE PTINRKKFIE FCQELIDRGL PDRGILWGIN TRVTDVLRDE ELLSFYRKAG
LIHVSLGTEA AAQLKLDRFN KETTVAQNKK AIELLRNAGI VVEAQFIVGL ENETAETLEE
TYQMAQDWKP DLANWAMYTP WPFSDLFREL KDTVEVYDFE KYNFVTPIIK PQAMDRGELL
DRTMSNYRRF YMRKALFSYP WAGTGDRRKY LFGCLKAFLK AGFQRKFYDL GKHGYWGPQT
RKKVSENIEK SFDKSRTLSE AQRAEYEEQA SKEEIKAARS HKAGTETERT PTEAPVQVHR
DGVPGKGKQQ KAAETDEV