| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1619 |
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| Symbol | |
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| ID | 4709637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1765633 |
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| End bp | 1767159 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639856084 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001003185 |
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| Protein GI | 121998398 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGA ATCCTGATGC CCCTGCTCCC GCTGTCGGTG GCCAGTCGCC CCACGCCGTG
GTTATCGGTG CCGGCTTCGG GGGGCTGGCA GCTGCGATCC GCCTCGGTGC GCGTGGTTAC
CGCGTCACCG TGGTGGATCG GCTCGATGGC CCCGGTGGCC GGGCCTACGT GCACCAGCAA
GACGGTTTTA CCTTCGATGC GGGGCCAACG ATCGTCACGG CACCGTTCCT TTTCCGTGAG
CTCTGGGAAC TGGCCGGGCG GCGTTTCGAG GACGACATCG ACCTGCGCCT GATGGATCCC
TTCTACCGGG TGCGCTTCGA CGACGGCAGC CACTTTGACT ACACCGGTGA TCCGGAGCGG
ATGCGGGCCG AAGTCGAGCG CTTCGCCCCG GGGGATCTCG ACGGCTATCA CCGCTACATG
GCGGCCAGCG AGGAGATCTT CCGGATCGGC TTCGAGCAGC TCAGCTATAA GCCGTTCAAC
CGGTTTACGG ACATGCTGCG CGTGGTCCCC GACCTGATCC GGTTGCAGAG CTACTACAGC
GTTCACGGCC TGGTCTCGCG CTACGTCAAG GATGAGCGGC TGCGCCAGGT GCTGAGCTTC
CATCCGCTGC TCATCGGTGG CAACCCCTTC TCGGTCACCT CGGTCTACTG CCTGATCGAG
TACCTTGAGC AGCACTGGGG CGTCCACTAC GTCATGGGCG GCACCGGGAA GCTCGCCAGC
GGCATGGCGG ATCTGGTCGC CGGGCAGGGG GGTGAGATCC GCTACAACGC CGATGTGGAA
GCGATCACCG TGGATCAGGG GCGTGCCACC GGTGTGGAGC TGGCCAACGG TGAGCGCATC
GATGCCGATG TCGTGGTCTC CAACGCCGAC GCCGCCTGGA CCTACCGCAA GCTCGTCCCG
GCGAGCGCCC GCAGTCGCTG GACCGATCGT CGCCTGGATC GGGCGCGCTA CTCCATGGGG
CTTTACGTCT GGTACTTCGG TACCCGTCGC CAGTACCACG ACGTACCGCA CCACACCATT
CTCATGGGGC CGCGGTACAA GGAACTCATC CAGGATATTT TCGAGCGCAA GGTGCTGGCG
GACGACTTCA GCCTCTACCT GCACCGTCCG ACGGCCACCG ATCCGTCGCT GGCGCCCGAG
GGCTGTGACG CCTTCTATGT GCTCTCGCCG GTGCCGCACC TCGGCAGCGA CGTGGACTGG
GAGACGCAGG CCGAGCCTTA TCGGCAGGCG ATCTCCAAGT ATCTCAGTCA GACCGTTCTG
CCCGGCCTGG AGGATGAGCT GGCGACCTCG CTGGTGGCTA CGCCGCTCGA CTTCCGTCAC
CGGTTGAAGT CCTGGCTCGG TACCGGTTTC AGCCTGGAGC CGGTGCTGCA GCAAAGCGCC
TGGTTCCGCC CCCACAATCG CAGTGAAGAT GTCCAGCACC TCTACCTGGT CGGCGCCGGT
ACCCACCCCG GTGCCGGTCT GCCCGGAGTG GTTTCTTCTG CCAAGATCCT CGACGAGGTA
GTCCCTGATG CTCGTACCTT CGCCTGA
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| Protein sequence | MRMNPDAPAP AVGGQSPHAV VIGAGFGGLA AAIRLGARGY RVTVVDRLDG PGGRAYVHQQ
DGFTFDAGPT IVTAPFLFRE LWELAGRRFE DDIDLRLMDP FYRVRFDDGS HFDYTGDPER
MRAEVERFAP GDLDGYHRYM AASEEIFRIG FEQLSYKPFN RFTDMLRVVP DLIRLQSYYS
VHGLVSRYVK DERLRQVLSF HPLLIGGNPF SVTSVYCLIE YLEQHWGVHY VMGGTGKLAS
GMADLVAGQG GEIRYNADVE AITVDQGRAT GVELANGERI DADVVVSNAD AAWTYRKLVP
ASARSRWTDR RLDRARYSMG LYVWYFGTRR QYHDVPHHTI LMGPRYKELI QDIFERKVLA
DDFSLYLHRP TATDPSLAPE GCDAFYVLSP VPHLGSDVDW ETQAEPYRQA ISKYLSQTVL
PGLEDELATS LVATPLDFRH RLKSWLGTGF SLEPVLQQSA WFRPHNRSED VQHLYLVGAG
THPGAGLPGV VSSAKILDEV VPDARTFA
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