| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1617 |
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| Symbol | |
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| ID | 4709615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1759541 |
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| End bp | 1764202 |
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| Gene Length | 4662 bp |
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| Protein Length | 1553 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639856082 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_001003183 |
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| Protein GI | 121998396 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCC ACACCCTACC GCCGAAACAG GATCTCTACG ATCCAGCCCT AGAGCACGAT
TCCTGCGGAA TCGGATTTGT CTGTCACATC CGCAACCAGA AGAGTCACCG CATCATTGAA
CAGGGGCTGG AGATCCTCGA ACGCCTCCAC CACCGCGGGG CAGTAGGCGC CGATCCAAAG
GCCGGAGATG GGGCCGGGAT GCTGATGCAG ATCCCCGACG CATTCTTCCG CGCCAAAGTG
GATTTCGAGT TGCCGGCGGC GGGCGATTAC GGCGTGGCCA TGGTCTTTTT CAGCCGTGAC
GAGGTGCAGC GCACCCAGTT GCAAGCAACC ATCGAGAGCC ATGTCCGCGA TGGTGGTCAG
CGGGTCCTTG GTTGGCGCGA TGTACCGGTG GATAACAGCG ACCTGGGTGA GACGGTTCTG
CCTACGGAGC CGATCGTCAA ACAGCTATTC ATCGGCCGTG GCGCAAACTG CCCCGACCAA
GAAGCGTTCG AGCGCAAGCT ATTCGTCATT CGCAAGCGCA TGGATAACGC CATCAACGCC
GCTGGCTACG ATGTCAGCGA TAACTATGTC ACCTCGATGT CCTCGCGGAC GATCACCTAC
AAGGGCATGC TGCTCGCCGG GCAGGTCGGA GGTTACTACC GCGATCTGCA GGATGAGCGC
TTTGTCAGCG CCCTGGCTCT GGTCCACCAG CGCTTCTCCA CCAATACCTT TCCAACCTGG
GATCTGGCGC AGCCGTTTCG CATGATCTGC CATAACGGCG AGATCAATAC CCTACGTGGC
AACGTCAACT GGATGGCTGC CCGCCGACAT ACGATGAGTT CCAAGGTGCT TGGGGATGAT
CTCGACACCA TCTGGCCCTT GATCCCTGAG GGCCAATCCG ACTCGGCATG CTTTGATAAC
GCCCTGGAGT TGCTGGTTCG GGGTGGGTAC TCGCTGGCCC ATGCGATGAT GCTTCTCATC
CCCGAGGCGT GGTCGGATAA CATCCTGATG GATGAGAAGC GACGCGCATT CTATGAGTAT
CACGAGGCCC TCATGGAACC GTGGGACGGT CCAGCGGCGA TTGCCTTCAC CGATGGCCGC
CAGATCGGTG CCACGCTGGA TCGCAACGGC CTGCGTCCGG CCCGTTACCT CGTTACGGAT
GACGACCTGG TCATCCTCGG CTCGGAAATG GGTGTCCTGG ATATCCCGGA GGAACGGATC
ATCCAGAAAT GGCGCCTTCA GCCGGGGCTG ATGCTGCTGA TCGACCTTGA AGAGGGGCGC
ATTATCAGTG ATCAGGAGAT CAAGACCCAG CTGGCCGAGG CCCATCCCTA TGCCGATTGG
TTGCGTCGCA CCCAGATCCG CCTTGAGGAT TTGCCGACCA GCGTCGGTCC CATGGCCCCT
GACGACACCA CGTTGCTCGA CCAGCAGCAG GCCTTCGGCT ACACCCAGGA AGACATCAAA
TTCCTGCTCA AGCCGATGGT GGCCTCCGGG GCCGAGGCGG TGGGGTCTAT GGGGGCCGAC
AATCCACTGG CGGTGCTGTC CAGCCGGCCC AAGCACCTGT CGAGCTACTT CAAGCAGAAC
TTCGCCCAGG TGACCAACCC GGCCATCGAT CCGATCCGCG AAGAGCTGGT GATGTCACTG
GTGTGCATGA TCGGACCACG CCCCAACTTG CTTGGCTTCG ACGAGGCCGG TCAGAACTGG
CGCCTGGAAA CCCCCCAGCC GGTCCTCACC AACGAGGACC TGGAACGCAT CCGGCATATC
GAATACAGCT CCTCAGGCAC CTTCCGCACC CGGACAGTCG ATATCTGTTA TCCCAGCAGT
GAAGGTGCCG AGGGTATGCA CAACGCCCTC GACCGGGTGT GTCAGAAGGC CAAGCAGGCG
GTGCTTGACG GCTACAACAT CCTCATCCTG TCGGATCGCA ATACCAACCT GGATCACATC
CCGATCCCGA TGCTGCTTGC CACCTCGGCG GTCCACCACC ATCTGACCCG TCACGGCCTG
CGCACCAGTT CGGGACTGGT TGTGGAGACC GGTGCAGCGC TTGAAGTGCA CCACTTCGCA
ACCCTCTGCG GCTACGGCGC CGAGGCAGTG AACCCCTACC TGGCTTTCGA CACCATCCAG
TCGATCCTGT CGAGCCTGCC GGAGCCAATG GACTTCGAGG CGGCCCAGCG GAGCTATATC
AAAGCCGTCG ATAAGGGGCT GCTCAAGGTC ATGTCGAAGA TGGGCATCTC CACCCTGGAA
TCCTATTGCG GTGCGCAGAT CTTCGACGCA GTCGGCCTGA ACAGCGAATT CGTCGATCAG
TACTTCACCG GTACCCCGAC CCGAATCGAG GGCGTCGGGC TCCAGGAGGT CGCCGAAGAG
GCGGTGCGCT GGCACGGTTC AGCCTACGGT AGCGCCGAAA TCTACCGTAC GCACCTGGAT
GTGGGCGGTG ATTACGAATA CCGGCTGCGT GGTGAGGATC ACGTTTGGAC CCCGGATACG
ATCGCCAAGC TCCAGCACGC CACCCGCGCC AACGACGCCC AGACCTACGC TCAGTTTACT
CAGCTGATCA ACGACCAGAG CGAGCGGTTG CTCACGCTGC GCGGTTTGAT GGACTTCAAG
TACGCCGATC AGGGGATACC GCTTGAAGAG GTCGAGCCAG CGAGCGAGAT CGTCAAACGC
TTTTCAACCG GCGCGATCTC CTTTGGTGCG ATCTCCTACG AGGCACACTC GGGCCTCGCC
AGGGCCATGA ATGCCCTGGG GGGCAAATCC AACACGGGTG AGGGCGGCGA GGAACCAGAG
CGTTTCGCGC CGCTCGAGGA CGGTTCGATG AACCCCGAGC GCTCGGCCAT TAAACAGGTC
GCCTCGGGGC GTTTCGGTGT GACCACCGAG TATCTGGCCA ACTCCGACGA CATCCAGATC
AAGATCGCTC AGGGCGCCAA GCCGGGCGAG GGCGGGCAGC TGCCTGGTCA AAAGGTCGAT
CGCAGCATCG CCAGGGTGCG CCACTCGACC CCTGGCGTGG GCCTGATCTC TCCGCCGCCG
CACCACGACA TCTACTCCAT TGAGGATCTC GCGCAGCTGA TCCACGATCT GAAGAACGTC
CAGCCGCGCG CGCGGATCTC GGTCAAGCTG GTCTCCGAGG TCGGCGTTGG TACCGTGGCC
GCGGGTGTAT CCAAGGCGCA CGCTGATCAG ATTACCATCG CCGGCTATGA CGGCGGCACC
GGCGCCAGCC CGTTGACCTC CATCAAGCAT GCCGGAAGCG CCTGGGAGAT CGGCCTGGCC
GAGACGCACC AGACGCTGGT CCACAACCGT CTGCGCGGAC GCGTCTCGGT CCAGGTCGAC
GGCGGCATGC GGACTGGCCG CGATGTGGTC ATCGGTGCCT TGCTCGGGGC TGACGAGTTC
GGCTTTGCGA CCGCACCGCT GATCGTTCAG GGCTGCATCA TGATGCGCAA GTGCCACCTG
AACACCTGCC CGGTCGGGGT GGCAACCCAG GACCCCGAGC TCCGCCGACG TTTCCGGGGG
CAGCCCGAAC ACCTGATCAA CTACTTCTTC TTCGTCGCCG AAGAGGTGCG GCAGATCATG
GCCAAGCTTG GCTTCCGCAC CGTCAATGAG ATGATCGGGC AGTCTGATCG GCTTGAAAAG
CGCTCGGCGA TCGACCACTG GAAGGCGAAG GGTCTGGACT TCTCAAGCAT GCTGGCCAAG
CCGGAAGCCG CCCCGGGCGT CTCGATCTAC AACAGCGAAC AGCAGGACCA CGGGCTGGAG
CAGGCCCTCG ACCACTTCCT GATCGAGCAG GCGCAGCCGG CGCTGCAGGA CGGCACCCCG
GTGCGCATGG AAACCCCGGT CTACAACTAC CATCGCACCG TAGGCACCAT GCTCTCGGGG
CGTATAGCGG AACGGTACGG TCATTCGGGG CTGGCCGATG ACACGATCTA TATCAAGGCC
GCAGGGACTG GTGGGCAGTC GTTTGGCGCC TGGCTCGCAC GGGGGGTGAC CATTGAGCTG
GCCGGCGATG CCAACGACTA TGTCGGGAAA GGCCTATCCG GTGGGCGCCT GATCGTGTAC
CCACCCGAGC ACGCCGGGAT CGCCGCCGCC GAAGACAACA TCATCGTCGG CAATACGGTC
CTTTACGGTG CGATAAGCGG TGAGTGCTTC TTCCGCGGGG TCGGCGGAGA GCGATTCTGT
GTTCGCAACT CCGGCGCGAC CGCCGTGGTT GAAGGGGTCG GCGATCACGG CTGTGAATAC
ATGACGGGCG GGGTCATGGT TTGCCTCGGC TCCACCGGGC GCAACTTCGC TGCAGGGATG
TCTGGCGGCA TCGCCTACGT CCTCGATGAG GAGGGCACCT TCGCCGAGCG CTGCAACCCG
GCCATGGTAG CGCTACAGTC CGTTGATCCG GAGCAGGCGT ACCAGGAGCG CATTGAGGAG
GTCGAACGGG GCGGGCCAAT CAACATCGAT GAGGATCCGC GCCGTCACGA CGTCAAACGG
CTGCGCACGC TGATCGAGCG CCACCTGGGC TACACAGGGT CGCACCGGGC CCGGGAGATC
CTCGACAACT GGGAGTTCTA TCTACCCAGG TTCGTGAAGG TCATGCCGCT TGAGTTCCGC
CGCGCACTCG ACGAGATCGA GGCGCAACGG GCACAGCCAC CGTCGCCGAC CCGGCCGGCG
AAGTTTCATC AGGCTCTCCA GGGGAGCGTT GATCATGGGT AA
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| Protein sequence | MSFHTLPPKQ DLYDPALEHD SCGIGFVCHI RNQKSHRIIE QGLEILERLH HRGAVGADPK
AGDGAGMLMQ IPDAFFRAKV DFELPAAGDY GVAMVFFSRD EVQRTQLQAT IESHVRDGGQ
RVLGWRDVPV DNSDLGETVL PTEPIVKQLF IGRGANCPDQ EAFERKLFVI RKRMDNAINA
AGYDVSDNYV TSMSSRTITY KGMLLAGQVG GYYRDLQDER FVSALALVHQ RFSTNTFPTW
DLAQPFRMIC HNGEINTLRG NVNWMAARRH TMSSKVLGDD LDTIWPLIPE GQSDSACFDN
ALELLVRGGY SLAHAMMLLI PEAWSDNILM DEKRRAFYEY HEALMEPWDG PAAIAFTDGR
QIGATLDRNG LRPARYLVTD DDLVILGSEM GVLDIPEERI IQKWRLQPGL MLLIDLEEGR
IISDQEIKTQ LAEAHPYADW LRRTQIRLED LPTSVGPMAP DDTTLLDQQQ AFGYTQEDIK
FLLKPMVASG AEAVGSMGAD NPLAVLSSRP KHLSSYFKQN FAQVTNPAID PIREELVMSL
VCMIGPRPNL LGFDEAGQNW RLETPQPVLT NEDLERIRHI EYSSSGTFRT RTVDICYPSS
EGAEGMHNAL DRVCQKAKQA VLDGYNILIL SDRNTNLDHI PIPMLLATSA VHHHLTRHGL
RTSSGLVVET GAALEVHHFA TLCGYGAEAV NPYLAFDTIQ SILSSLPEPM DFEAAQRSYI
KAVDKGLLKV MSKMGISTLE SYCGAQIFDA VGLNSEFVDQ YFTGTPTRIE GVGLQEVAEE
AVRWHGSAYG SAEIYRTHLD VGGDYEYRLR GEDHVWTPDT IAKLQHATRA NDAQTYAQFT
QLINDQSERL LTLRGLMDFK YADQGIPLEE VEPASEIVKR FSTGAISFGA ISYEAHSGLA
RAMNALGGKS NTGEGGEEPE RFAPLEDGSM NPERSAIKQV ASGRFGVTTE YLANSDDIQI
KIAQGAKPGE GGQLPGQKVD RSIARVRHST PGVGLISPPP HHDIYSIEDL AQLIHDLKNV
QPRARISVKL VSEVGVGTVA AGVSKAHADQ ITIAGYDGGT GASPLTSIKH AGSAWEIGLA
ETHQTLVHNR LRGRVSVQVD GGMRTGRDVV IGALLGADEF GFATAPLIVQ GCIMMRKCHL
NTCPVGVATQ DPELRRRFRG QPEHLINYFF FVAEEVRQIM AKLGFRTVNE MIGQSDRLEK
RSAIDHWKAK GLDFSSMLAK PEAAPGVSIY NSEQQDHGLE QALDHFLIEQ AQPALQDGTP
VRMETPVYNY HRTVGTMLSG RIAERYGHSG LADDTIYIKA AGTGGQSFGA WLARGVTIEL
AGDANDYVGK GLSGGRLIVY PPEHAGIAAA EDNIIVGNTV LYGAISGECF FRGVGGERFC
VRNSGATAVV EGVGDHGCEY MTGGVMVCLG STGRNFAAGM SGGIAYVLDE EGTFAERCNP
AMVALQSVDP EQAYQERIEE VERGGPINID EDPRRHDVKR LRTLIERHLG YTGSHRAREI
LDNWEFYLPR FVKVMPLEFR RALDEIEAQR AQPPSPTRPA KFHQALQGSV DHG
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