| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1614 |
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| Symbol | |
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| ID | 4709602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1755425 |
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| End bp | 1756987 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856079 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001003180 |
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| Protein GI | 121998393 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGT CGCTGCGATG CCCAACCGCA GGAGAACAAC AAGCCGTGGT GATCGGGGCC
GGAGTCGGGG GGCTTGCCGC CGCCATCGAT CTGGCCTCTG CCGGCCTGCG CGTCACCCTG
CTGGAACAAG CCCCCAGCCC CGGAGGCAAG CTGCGCCCGG TCTGCGTCGG CGACGCCTGG
CTCGACGCCG GACCGACGGT CTTCACCATG CGAGGGGCCT TCGAAGAGCT CTTCGCCAAC
GCCGGAGAAC GGCTTGAGGA CCATTTGCGC CTGCGCCCGG TTGAGCGCCT GGCGCGACAC
GCCTGGGCGG ATGGCGGCCA GCTGGACCTG TTCGCTGATC CGCGCCGCTC CGCGGAGGCT
ATTGGCGAAT TCGCCGGCCC CGAAGAGGCC CGCCGCTTCC GCGCTTTCTG CCGACGTGCC
GCCGAGATTC ACGACACCCT GGACGCCACC TTCATGCGCG CCCAGCGCAC CACCCCGCTC
GGGCTATTCC ACCGGGTGGG TTACCGCAAC CTGGGCGCCA TGCTGCGCAT CAGTCCATTT
ACCACCCTCT GGCAGGCCCT CGGCCGGTAT TTCAAGGACC CGCGCCTGCG CCAACTCTAC
GGTCGCTACG CAACCTACTG CGGCTCGTCC CCCTTTGCCG CGCCGGCCAC ACTGATGCTG
ATCGCCCATG TGGAGTCGGA GGGGGTCTGG CAGGTGGATG GCGGCATGCA TCAGCTGGCG
GCCGCGCTGG CCGGCCTCGC CGAGCGCTGC GGGGTCGAGC TGCGCTGCGC GACGCAGGCG
CAACGAATCC ACACCACCCG GGGCCGGGCC AGCGGGGTCG AGCTGGCCAC CGGCGAGATC
CTGCCGGCGG ACGTGGTGGT CAGCAACAGC GACGCTGCCG CTCTGGCGCA GGGACTGTTC
GGCGATCACC TGCGCCCGGC CGTCCGCCGG CAGCCCCCGC GGGTCCGCTC ACAGTCCGCT
ATCACCTGGA ACTGGCGAGC CGAGACCCGG GGTTTTCCCC TCCACCACCA CTCGGTCTTC
TTCAGCAGCG ATTACGCCGA CGAGTTCGAC GCCGTCTTCC GCCGCGGCGA ACCGCCACCG
GAACCGACGG TCTACATCTG CGCCCAGGAT CGCCACGATC AGCAGTCGGT GACGGGCCCC
GAGCGCCTGC TCTGCCTGAT CAACGCCCCG GCCCACGGTG ACGTGAAAAG CTTCAGCGAC
ACGGAGATCC ATCGATGCCA ACACCAGACC CTCTCGCTCC TGGAACGCTG TGGCCTCAGC
CTCCAGCCCA CCGAGGAGCC CCCGGTGATC CACACGCCGA CCGACTTCGA GCGGCGCTAT
CCGGCCACCG GAGGGGCCCT GTACGGGATG GCCAGCCACG GCTGGCGGGC CTCCTTTCAG
CGGCCGGCGG CTCGCACACG AGTACCGGGC CTCTATCTGG CGGGGGGCAG TACACACCCC
GGGGCGGGGC TGCCGATGGC GATGATGTCG GGGCGCCTGG CGGCGGAGCA GGTGCTGGCC
GACCTGACTT CCGACACGCG GTTCCGTCGG GCGGCTACGT CTGGTGGTAC CTCGACGCCC
TGA
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| Protein sequence | MSTSLRCPTA GEQQAVVIGA GVGGLAAAID LASAGLRVTL LEQAPSPGGK LRPVCVGDAW
LDAGPTVFTM RGAFEELFAN AGERLEDHLR LRPVERLARH AWADGGQLDL FADPRRSAEA
IGEFAGPEEA RRFRAFCRRA AEIHDTLDAT FMRAQRTTPL GLFHRVGYRN LGAMLRISPF
TTLWQALGRY FKDPRLRQLY GRYATYCGSS PFAAPATLML IAHVESEGVW QVDGGMHQLA
AALAGLAERC GVELRCATQA QRIHTTRGRA SGVELATGEI LPADVVVSNS DAAALAQGLF
GDHLRPAVRR QPPRVRSQSA ITWNWRAETR GFPLHHHSVF FSSDYADEFD AVFRRGEPPP
EPTVYICAQD RHDQQSVTGP ERLLCLINAP AHGDVKSFSD TEIHRCQHQT LSLLERCGLS
LQPTEEPPVI HTPTDFERRY PATGGALYGM ASHGWRASFQ RPAARTRVPG LYLAGGSTHP
GAGLPMAMMS GRLAAEQVLA DLTSDTRFRR AATSGGTSTP
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