Gene Hhal_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1608 
Symbol 
ID4709572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1748451 
End bp1749980 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content64% 
IMG OID639856073 
Productchlorophyllide reductase subunit Z 
Protein accessionYP_001003174 
Protein GI121998387 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR02014] chlorophyllide reductase subunit Z 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATCC CGGATCTCGA CCGTGCGGGG GGCTACTGGG GGGCCGTATA CGCGTTCACG 
GCGGTTAAGG GGCTCCAGGT GATCATCGAC GGCCCGGTTG GTTGCGAGAA CCTCCCGGTC
ACTGCCGTAC TGCATTACAC CGACGCCCTG CCGCCCGAGG AGCTCCCGGT CGTCGTCACC
GGCCTCTCGG AGGAAGAGCT GAACCGCGAG GGCACCGAGG GTGCCATGAA GCGCGCCCAC
GGGACCCTCG ACCCACAGCA GCCGAGCGTC GTTGTCACTG GCTCCATCGC CGAGATGATC
GGCGGCGGCG TTACTCCGGA GGGAACCGGT ATCCGCCGCT TCCTGCCCCG GACCATCGAC
GAAGACCAGT GGCAGGCCTC GGACCGGGCG CTACGCTGGC TCTGGGAGCA GTTCGGGATG
CGCCGGGGGC GCCCGCCTCG TCCGCGGGAG CGGGAGGCCG GCGCTCCGCC TCGAGTCAAC
ATCATCGGCC CCGCCTACGG CATGTTCAAC ATGCCTTCGG ATCTTGCCGA GGTCAGGCGG
CTGGTCGAAG GGATCGGCGC CGAGGTCAAT CTGGTCTTCC CTCTCAGTTG CCACGTGGAC
CAGATTCCGC GGCTCATCGA TGCCGACGTC AACATCTGCA TGTATCGGGA GTACGGCCGT
GGGCTGTGTG AAGCCCTCGG GCGCCCGTAT CTGCAGGCGC CGGTCGGTCT GCACAGCACC
ACGCGTTTCC TGCGCGCGTT GGGTGAGCAG CTTGGGCTCG ATCCGGAGCC GTTTATCGAA
AAAGAGAAAC ACACCACGCT AAAACCGCTT TGGGATTTGT GGCGTTCTGT CACGCAGGAT
TTTTACGCCA CGGCGAGTTT TGGCATTGTT GCCGCGCAAA CCCATGCCCA GGGTATTCAG
AAATTTCTTG AGAATGATCT GGGTATGCCC TGCAATTTCG CCTTCTCTCG GGCGCCCGGC
GTCAAGATTG ATAACGACGC CATTCGTGCC GCAATCCGCG GCAACCCGCC ACTTGTGCTT
TTCGGAAGTT ACAACGAGCG GATGTATCTA GCGGAAGTTG GGGGACACGC CAGATATATC
CCTGCCTCCT TCCCTGGTGC GGTCATACGC CGCCACACGG GGACCCCGTT CATGGGGTAC
GGTGGAGCCT GTTACATCGT GCAGGAGGTT TGTAACGCGC TCTTCGACGC CCTGTTCCAC
ATCCTGCCGT TAGGTACGGA AATGGATCAG GTGGAGGCCA CTCTGGCCCG CGGTTCGCAA
GCAGAGAAAA CGGCGCAAAA TGTCGCAGCC GACTCGCGAG CCGTCCAGAG CGAGGCCTCC
GAAACCTTGA CCTGGGATGA AGAGGCTCGA GCGGTCCTCG ACCGCTGGGT ACAGGAGCAA
CCGGTCTTGG TCCGCATATC CGCCACCAAA CGGTTGCGTG ATGCCGCGGA GCAGCGAGCC
AAGCAAGCCG GTGAGACACG AGTCACCGCG GATCGGGTCA AGGGGTGCAG CGACGTGCTG
CCAGGGGCAG GGCCGGGGCG CGGCAACTGA
 
Protein sequence
MLIPDLDRAG GYWGAVYAFT AVKGLQVIID GPVGCENLPV TAVLHYTDAL PPEELPVVVT 
GLSEEELNRE GTEGAMKRAH GTLDPQQPSV VVTGSIAEMI GGGVTPEGTG IRRFLPRTID
EDQWQASDRA LRWLWEQFGM RRGRPPRPRE REAGAPPRVN IIGPAYGMFN MPSDLAEVRR
LVEGIGAEVN LVFPLSCHVD QIPRLIDADV NICMYREYGR GLCEALGRPY LQAPVGLHST
TRFLRALGEQ LGLDPEPFIE KEKHTTLKPL WDLWRSVTQD FYATASFGIV AAQTHAQGIQ
KFLENDLGMP CNFAFSRAPG VKIDNDAIRA AIRGNPPLVL FGSYNERMYL AEVGGHARYI
PASFPGAVIR RHTGTPFMGY GGACYIVQEV CNALFDALFH ILPLGTEMDQ VEATLARGSQ
AEKTAQNVAA DSRAVQSEAS ETLTWDEEAR AVLDRWVQEQ PVLVRISATK RLRDAAEQRA
KQAGETRVTA DRVKGCSDVL PGAGPGRGN