Gene Hhal_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1605 
Symbol 
ID4709559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1746546 
End bp1747376 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content62% 
IMG OID639856070 
Productphotosynthetic reaction center subunit L 
Protein accessionYP_001003171 
Protein GI121998384 
COG category 
COG ID 
TIGRFAM ID[TIGR01157] photosynthetic reaction center L subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TCGACTTTGA AAAAAAATAC CGTGTCCGAG GAGGTACACT CCTCGGAGGG 
GACTTGTTTG ACTTTTGGAT TGGGCCGTTC TACGTGGGCA TCTTCGGGGT GCTTACGGCG
ATCTTCGCGG TCCTTGGCAC CGTCCTGATC ATCTACGGTG CTTCGCAAGA CACCTTCAAT
CTGTGGCAGA TCTCCATTGC CCCACCTGAC CTGAGCTATG GGCTGGCCCT TGCGCCCATG
ATGGAGGGCG GCCTCTGGCA GATCATCACC GTCTGCGCCC TGGGCGCCTT CATTGCGTGG
GCCCTGCGTC AGGCGGAGAT CTCCAAGAAG CTCGGCATGG GCTATCACGT GCCGGTGGCC
TTCGCGGTCG CGATCCTGGC CTACGCGACG CTGGTGGTCT TCCGGCCGCT TCTGATGGGC
GCCTGGGGGC ATGGGTTCCC GTACGGGATC CTGAGCCACC TGGATTGGGT GTCGAACGTG
GGGTACCAGT ACCTCCACTT CCACTACAAC CCGGCCCACA TGCTGGCCGT GACCTTCTTC
TTCACCACCA CCCTGGCCCT GGCCCTGCAC GGTGGCTTGA TCCTGTCGGT CACCAACCCG
AAGAAGGGCG AGTCGGTGAA GACCGCGGAG CATGAGAATA CCTTCTTCCG CGACGTCGTC
GGCTACTCGA TCGGCAGCCT GGGTATCCAC CGTCTCGGCC TGTTCCTGGC CCTGAACGCC
GCTTTCTGGA GTGCCGTGTG CATCATCATT AGCGGCCCGT TCTGGACCCG CGGTTGGCCC
GAGTGGTGGA ACTGGTGGCT CAACGTCCCG ATCTGGTCCT GGGGGGGGTA A
 
Protein sequence
MAMLDFEKKY RVRGGTLLGG DLFDFWIGPF YVGIFGVLTA IFAVLGTVLI IYGASQDTFN 
LWQISIAPPD LSYGLALAPM MEGGLWQIIT VCALGAFIAW ALRQAEISKK LGMGYHVPVA
FAVAILAYAT LVVFRPLLMG AWGHGFPYGI LSHLDWVSNV GYQYLHFHYN PAHMLAVTFF
FTTTLALALH GGLILSVTNP KKGESVKTAE HENTFFRDVV GYSIGSLGIH RLGLFLALNA
AFWSAVCIII SGPFWTRGWP EWWNWWLNVP IWSWGG