Gene Hhal_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1600 
Symbol 
ID4709624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1740780 
End bp1741697 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID639856065 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_001003166 
Protein GI121998379 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGGGG CAGCTCATCC TCAGTCCGCG CGCACGCGGC CGCGTCTCGC CACGGTGTTC 
GAGATCATGC ATCCGATCAC CTGGTTCGCG CCGATGTGGG CATTCGCTTG CGGCGTCATC
TCGGCGGGTG TCGCGCCCGA GGGAATCCAC TGGCTCATGA TCGCCGCTGG CGTCCTGCTA
GCCGGTCCGC TGGTCTGTGG TACCAGCCAG ATCGTGAACG ACTGGTACGA CCGCCACGTG
GACGCCCTCA ACGAACCCGA CCGCCCGATC CCTTCGGGGC GAATGCCCGG GCAATGGGGC
CTCTACCTAG GGATCGCCAC GACGGGCCTC GCGCTGCTGG TCGCAGCGGC CCTCGGACCG
GTGGTCTTCC TGGCCGCCTG CGTCGGCCTC TTTCTGGCCT GGGCCTACAG CGCACCACCG
CTGCGTCTCA AGCGCAACGG CTGGATCAGC AATGCCGCCG TGGGTCTTTC CTACGAGGGG
CTGCCCTGGG TCACCGGCGC GGCGATCATG GCCACGGGCC TGCCCGACTG GCGGATCCTG
ATCGTGGCCC TGCTCTACAG CATCGGCGCC CACGGCATCA TGACCCTCAA CGATTTCAAG
GCGATCGACG GCGACCGGCA GATGGGGCTC AAGACCGTGC CCGTCCACCT CGGGGCGCAG
AACGCCGCAC GCCTGGCCTG TGTGGTCATG GCCCTGCCGC AAGTGGCAGT GATCAGCCTG
CTGCTTGCCT GGGATCAACC CTGGCACGCC CTGATTGTCG GTGGCCTGCT CGCCGCTCAG
TTGCTGCTCA TGGTCCGCTT GCTGCGTGAT CCCAAGGCGT ACGCCCCCTG GTACAACGCC
ACCGGCACCA CCCTCTACGT GCTCGGTATG CTGGCTTCGG CGTTCGCGCT GGGCGGCATG
CTCGGAGGCA GCGCATGA
 
Protein sequence
MSGAAHPQSA RTRPRLATVF EIMHPITWFA PMWAFACGVI SAGVAPEGIH WLMIAAGVLL 
AGPLVCGTSQ IVNDWYDRHV DALNEPDRPI PSGRMPGQWG LYLGIATTGL ALLVAAALGP
VVFLAACVGL FLAWAYSAPP LRLKRNGWIS NAAVGLSYEG LPWVTGAAIM ATGLPDWRIL
IVALLYSIGA HGIMTLNDFK AIDGDRQMGL KTVPVHLGAQ NAARLACVVM ALPQVAVISL
LLAWDQPWHA LIVGGLLAAQ LLLMVRLLRD PKAYAPWYNA TGTTLYVLGM LASAFALGGM
LGGSA