Gene Hhal_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1592 
Symbol 
ID4709082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1730162 
End bp1732063 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content64% 
IMG OID639856057 
Productheat shock protein 90 
Protein accessionYP_001003158 
Protein GI121998371 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAG ATACGCAGAG CGAGACCCTC GAATTCCAGG CCGAGGTTCA GCAGCTGCTG 
AGCCTGATGA TTCACTCGGT GTACTCGAAC CGGGAGGTCT TCCTCCGCGA GCTCATCTCC
AACGCCTCGG ATGCCATCGA TAAGCTGCGC TTCGAGGCGC TTCAGCAGGA ATCCCTCTAC
GAAGACGATC CGGAACTCAA GATCCGCGTC GAGGCCGATC CAGAGGCCCG CACCGTCACC
GTGATCGACA ACGGCATCGG CATGAGTCGC GAGGATGTGA TCGAAAACCT CGGGACCATC
GCCCACTCGG GGACCCGCCG TTTCCTTGAG CAGCTGACGG GTGATCAGCA CAAGGATGCG
CAGCTGATCG GCCAGTTCGG TGTCGGATTT TATTCGGCCT TTGTGGTCGC CGACCGGGTT
GAGGTCTACA CCCGCAAGGC CGGCGCCGCT GCAGCTGAGG GCGTGCGCTG GAGTTCTGAT
GGCCAGGGGG CCTACACCGT CGACACCGTC GAGCGCGCCG AGCGCGGCAC CGCCGTGGTG
CTGCACCTCC CCGAGGCGCA GCAGGAGTTC TGCGACGACA TGCGCCTGCG CCAGATCATC
CGCAAGTACT CCGACCATAT CTCGGTCCCC ATCGAGATGC CGGTGCGCAA CGCGGACCAG
GGTGATGACG CGGACAGTGA GGCCGAGGCC CCGCAGTGGG AGATCGTCAA CCGCGCCTCG
GCGCTGTGGA TGCGGCCGAA GAGCGAGATC TCCGAGGAAG ATTATCAAGA GCTGTACAAG
CACGTCGCCC ACGACTTCGA CGATCCCCTG ACCTGGATCC ACAACCATGT CGAGGGGCGC
CAGTCCTATG TCTCGTTGCT CTACATCCCC AAGCGCCCTC CGTTCGATCT CTACGAGCAG
AAGCCGGCCC ACGGGGTCAA GCTCTATGTG CGGCGCGTCT TCATCACCGA GGATACGGAG
CACCTGCTGC CGCGCTACCT GCGTTTCGTC CGGGGCGTCA TCGACTCGGA CGATCTGCCG
CTGAACATCT CCCGGGAGAT GTTGCAGCAC AACCCGATGA TCAGCTCGCT GCGTTCGGCC
TCGGTCAAGC GCATCCTCGA CCGGCTCGAG TGCATGGCGA AGAACGAGCC GGAGGACTAC
GCCACCTTCT GGCAGGCCTT TGGGCGGGTC TTCAAGGAGG GCATCGCCGA GGATCCGGGC
AACCGGGAGC GCATCGCGCG GCTGCTGCGC TTCTCCTCGA CCCACGAAGA GAAGGAGACG
CCGGACGTCA GTCTGGACGA CTACGTCGCC CGGATGAAGG ACGGCCAGGA GAAGATCTAC
TACGTAACGG CGGAGAGCTT CAACGCCGCG CGGAATAGCC CGCATCTGGA GATCTTCCGT
CGCCACGGCA TCGAGGTCCT GCTGCTCCCG GATCCCGTCG ACGAGTGGTT GGTGGCCCAT
CTGCACGAGT ACGATGGCAA GCAGCTGGCG TCGGTGGCCA AGGGTGAGCT CGATCTGGAG
GCCCTCGGCG AAGAGGACGA CAAGCAGGCG CGGCAGGAGA AGGAGCAGGC CTACGAAGAC
CTCTGTAAGC GTCTGGGTGA GACCCTGGGT GAGCGGGTCA GCGAGGTCCG GGTCAGCCAC
CGCCTGACCG ATTCGCCGGC CTGCCTGGTC GTCGGCGAGT ACGATTTCGG CATGGGCATG
CAGCGCCTGT TGCAGGCTGC CGGGCATCAG CTTCCTGCAG GTCAACCGGC GCTGGAGGTT
AATCCGGATC ACTCCGTGAT TGAGCGATTG GCGACGGAGT CGGGACAGCG CTTCGAAGAC
TGGGCCTTGA CGCTCTACGA GCAGTCGCTG CTCGCCGAGG GAGGGCAGCT GGAGGATCCA
GCCGCGTATG TCCGACGTGT TAATAACCTC CTGGCTGGCT AG
 
Protein sequence
MSADTQSETL EFQAEVQQLL SLMIHSVYSN REVFLRELIS NASDAIDKLR FEALQQESLY 
EDDPELKIRV EADPEARTVT VIDNGIGMSR EDVIENLGTI AHSGTRRFLE QLTGDQHKDA
QLIGQFGVGF YSAFVVADRV EVYTRKAGAA AAEGVRWSSD GQGAYTVDTV ERAERGTAVV
LHLPEAQQEF CDDMRLRQII RKYSDHISVP IEMPVRNADQ GDDADSEAEA PQWEIVNRAS
ALWMRPKSEI SEEDYQELYK HVAHDFDDPL TWIHNHVEGR QSYVSLLYIP KRPPFDLYEQ
KPAHGVKLYV RRVFITEDTE HLLPRYLRFV RGVIDSDDLP LNISREMLQH NPMISSLRSA
SVKRILDRLE CMAKNEPEDY ATFWQAFGRV FKEGIAEDPG NRERIARLLR FSSTHEEKET
PDVSLDDYVA RMKDGQEKIY YVTAESFNAA RNSPHLEIFR RHGIEVLLLP DPVDEWLVAH
LHEYDGKQLA SVAKGELDLE ALGEEDDKQA RQEKEQAYED LCKRLGETLG ERVSEVRVSH
RLTDSPACLV VGEYDFGMGM QRLLQAAGHQ LPAGQPALEV NPDHSVIERL ATESGQRFED
WALTLYEQSL LAEGGQLEDP AAYVRRVNNL LAG