Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1585 |
Symbol | rnhA |
ID | 4709237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1724408 |
End bp | 1724857 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639856050 |
Product | ribonuclease H |
Protein accession | YP_001003151 |
Protein GI | 121998364 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.272644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGAGC AGCGCGGCGT GGTGGAGGCA TTCACGGATG GGGCCTGTCG AGGTAATCCG GGCCCCGGAG GGTGGGGCGT GCTGCTACGC TACGGCGAGC ATGAGCGAGA GCTCTACGGT GGGGAGCCGG AGACCACCAA CAACCGCATG GAACTAACCG CGGCGATCCG CGCCCTGGAG GCCTTGGATC GGCCCTGCCG GGTGGTGCTG ACCACCGACT CCCAGTACGT ACGTCGCGGG ATCACCGAGT GGCTGGAGGG CTGGAAGCGC CGGGGCTGGC GCACCGCATC GCGCAAGCCG GTGCTCAACC AGGACCTGTG GCAACGGCTC GATGAGCTGG CCGCGTACCA CCAGGTCGAC TGGCACTGGG TGCGTGGCCA CGCCGGTCAT GCGGAGAATG AGCGTGCCGA TGCTCTGGCC AACCAGGGGA TCGACGAGCT GGTTGCCTAG
|
Protein sequence | MTEQRGVVEA FTDGACRGNP GPGGWGVLLR YGEHERELYG GEPETTNNRM ELTAAIRALE ALDRPCRVVL TTDSQYVRRG ITEWLEGWKR RGWRTASRKP VLNQDLWQRL DELAAYHQVD WHWVRGHAGH AENERADALA NQGIDELVA
|
| |