| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1577 |
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| Symbol | |
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| ID | 4709759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1717469 |
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| End bp | 1718668 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856041 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001003143 |
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| Protein GI | 121998356 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTAG CGGAAAGTAC CGAGGCCAGC TCCAGGGTCT GGTACCTCAT TGAAGAGGGG
CAGGGGTTGC GGGTGGGAAG AGCGCGGTCG GCTGGTGCGA CTTCGATCCC CCTTGAGGCG
GGTTTCTACG TGGAGCCGGA AGCCGCCGCA CCGCTGATCC GGGCTGTGGA AAGGGCGCTT
TCCGAAGGGG CGGATCCGGA CCGGTATGAA GAGTCTGACG CACCGCTGGG CCGGGGGCGG
AGCCCATCTG GCGATGCGGG GCCACGCCGG CTGGGCTTGG TGACCGGTGA CCCGCGCATG
ATCCAGCTTT GTCGGGATAC GGAGCGGCTC GCTCCCTCGG ATGCTACCGT CCTGCTTCTC
GGTGAGAGTG GCACCGGGAA GGAGCTCTTT GCGAAGGCTC TGCATGGGCT GAACCGAGTG
CGATCCGCTG CTCCGCTGGA GGCGATTAAC TGCGCCGCGA TCCCTTCGGA ACTGCTTGAG
AGTGAGCTGT TCGGGTTTGA GCGTGGCGCC TTTACGGGGG CCTACCGGGC CCGGGTGGGG
CGGATCGAGC GTGCCAATGG GGGAACCCTA TTCCTCGACG AGATCGGAGA GTTGCCCCTG
GAGGTTCAGG CGAAGCTGCT GCGCTTCCTG CAACAGCGGA CGGTTCAGCG CTTGGGGGGG
CGACGAGAGA TCCCGGTGGA CGTCCGGGTG GTTTGCGCGA CCAACCGGGA CTTGGTCGAG
CGGATGGGAG AGGGAGCGTT CCGTGACGAC TTCTATTACC GGGTTGCCGA GGTTCAACTG
CGGCTTCCGC CCCTGCGCGA GCGGCCAGGA GATCCCGCAC TGATTGCCCA CGCGCTTCTC
AAAGGAATGG TCCGGCAGCA CAAGGCCCGA GCGCGGAAGC TGGGCAGTGA TGCCTTGGCC
GTGATCGCCG CCTATCGCTG GCCTGGCAAC GTTCGTGAAC TGGAAAACGC GCTCCGGCGA
GCGGTGATCC TCTCGGAGGG AGGTGCCATT CGTGCCGAAG ACCTCGGGCT GCCGCTGCCG
CGTTCTCTGA CCGTTCAGCG GGATCTGCCC AGGTTGCGCG AGGTGCGCGA TGAGGCGGAG
CGACGCGTCG TCGCCGAGGC CTTGGGCCGG TGCAACGGGA ACATCTCGCG CGCAGCGACG
GAACTGGGAG TTACGCGGCC AACGATCTAC GAGCTGCTGG CTAAGCACGG GATGCGCTAA
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| Protein sequence | MAVAESTEAS SRVWYLIEEG QGLRVGRARS AGATSIPLEA GFYVEPEAAA PLIRAVERAL
SEGADPDRYE ESDAPLGRGR SPSGDAGPRR LGLVTGDPRM IQLCRDTERL APSDATVLLL
GESGTGKELF AKALHGLNRV RSAAPLEAIN CAAIPSELLE SELFGFERGA FTGAYRARVG
RIERANGGTL FLDEIGELPL EVQAKLLRFL QQRTVQRLGG RREIPVDVRV VCATNRDLVE
RMGEGAFRDD FYYRVAEVQL RLPPLRERPG DPALIAHALL KGMVRQHKAR ARKLGSDALA
VIAAYRWPGN VRELENALRR AVILSEGGAI RAEDLGLPLP RSLTVQRDLP RLREVRDEAE
RRVVAEALGR CNGNISRAAT ELGVTRPTIY ELLAKHGMR
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