Gene Hhal_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1566 
Symbol 
ID4710600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1706104 
End bp1707105 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content58% 
IMG OID639856030 
Productglycosyl transferase family protein 
Protein accessionYP_001003132 
Protein GI121998345 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCA CCCCAAGCGT CTCCGTCATC ATCCCCGCGC TGAACTGTGC GCCTTTTATT 
AGTGCCGCGA TCGAGAGCGT CCTCAAACAG GGTGGTGATC AGCTAGAGGT ACTTGTCATT
GACGACGGAT CTACGGACGA GACCGCAAAT ATCGTCCGGA GCTATCCAAG CCCCGTGCAT
CTGCTCCGCA CGCAGACACC TCGATCCGGC GCTGCTGCCG CCAGAAACGT GGGGCTGCGC
CACGCACACG GCCGCCTCAT AGCCTTCCTG GACGGAGACG ATGTCTGGTT ACCCGGGAAG
CTAGCACTGC AGACCAGCAC ATTGGAGAAC CACCCCGACG TAGCACTCGT CTGCACTCGC
GGCGGAAGAT GGGAACCGGA CAACGAATCC TATGAACAAG CCCATCAACG CTTCATCACT
GCCGATGCCA CCTCGGAACC AACTGACTTC TACCCCGCCG GCTGGATTTA CCACATGCTT
TTGCTGCGAC CAGCCTGGGT GTGGACCTCT ACAGTGGTAA TGCGCCGAGA ACTGGTGGAG
AAGGTCGGTG AGTTTGACGA GTCTTTGCGC TTAGGCCAGG ACTACGAGTA TTGGCTTCGC
TGCTCCCGCG AAACCCAAAT TTTACGCGTG GCGAAAGTGC TAGCCCTCTA CCGACAACAC
GCCAACAATT CCACCAATAA ACCGCGCAAC CGGAACTTTG AACTAGAAGT GGTTCAAAGA
GCGCTCGATC GCTGGGGAAG GCATGGCCCC GATGGCCAAG CTGCTGATAA GAAACAAATC
AAGAAGAGAT TTGCACGAAT GCATTTCCGT ATGGGGTATC AGCATTTCTG GGCTGGAGAC
CCGCGCATTG CAGCAAAAGA ATTCTATCAC TCGATCCGCA CCAACCCGAG AGCCTGGCGT
GCGTGGGCCT ATGCCAGCGC ATCAGCAGTA CGCGGTCTTT TCGTCCCCAC CCCCCGGAAC
CAGAAACCTC CGAGCGGGGG CGAGCGCCGG CACGGAGAGT AG
 
Protein sequence
MASTPSVSVI IPALNCAPFI SAAIESVLKQ GGDQLEVLVI DDGSTDETAN IVRSYPSPVH 
LLRTQTPRSG AAAARNVGLR HAHGRLIAFL DGDDVWLPGK LALQTSTLEN HPDVALVCTR
GGRWEPDNES YEQAHQRFIT ADATSEPTDF YPAGWIYHML LLRPAWVWTS TVVMRRELVE
KVGEFDESLR LGQDYEYWLR CSRETQILRV AKVLALYRQH ANNSTNKPRN RNFELEVVQR
ALDRWGRHGP DGQAADKKQI KKRFARMHFR MGYQHFWAGD PRIAAKEFYH SIRTNPRAWR
AWAYASASAV RGLFVPTPRN QKPPSGGERR HGE