| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1557 |
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| Symbol | |
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| ID | 4710776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1692743 |
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| End bp | 1693711 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639856021 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001003123 |
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| Protein GI | 121998336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.367828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATGG CTCGATTACC GGCCCGCGCG GCGTGGTTTG CCTTTCAGGC TCAGCCCCGA
CTATCGATTC TCATATACCA CCGCGTCCGT CCCGCACCGG ATCCGATGCG CCCCGATGAT
CCGGATGTTC AGCGGTTTGA GGAGCAGATT GCCTGGCTGC GTCACGCCTG CCACGTTTGG
CCTTTGAAGG AGGCCATCCG CCACTTGTAC GCCGGCACCC TGCCCCGCGG GTCCGTGGCC
ATAACTTTTG ACGACGGCTA CGCGGACAAC CATGACTACG CCTTACCTGT GTTGCTCCGG
CAGGGCGTCC CCGCAACCTT CTTCATCGCG ACCGGATTTC TTAACGGCGG GCGGATGTTC
AACGATACGC TCATGGAGGC GTTCGCGAAC ACGGAACAGC TGGCTGTCGA ACTGCCCGAG
TTGGGACTGC CGCACCTTCC CCTTGACGGG GTCGAGGCAC GCTGCCAAGC GAGCCGGCAG
GTCACCAAGG GCATCAAGCA CCTCCCCCCG CCGGAGCGAG CAGCCTCGGT GGAGCTGATC
CTAGACCGCC TGGGGCGTCC CGATTGCGGC CAATCCCCCA TGATGACGGA TGCACAGGTC
AAGGCGCTGT ACGAACAGGG CATGGAGATT GGCGCCCACA CCGTTACCCA CCCCATCCTA
CGAACCCTGG ATGAGGCCTC GGCACGCGAT GAGCTCGCGC AGAGTCGAGA CTACCTGCAG
ACACTGCTCG GTGCACCCGT TGGCCTGTTC GCCTACCCCA ACGGCAAGCC GGGGCAGGAC
TACGGCCCCC GCGAACCGGG CCTCCTGCAG GAACTCGGCT TCAAAGCGGC GGTGTGCACT
GCTCCCGGCG GGGCCAACCG GGGTCGCGAT CCCTATCAAC TACCTCGTTA CACCCCTCAC
GGCCGCACGC CCATGCGCTT CATGACCCAA CTGATACGTT GCAGTCGCGA GGAGGCTGAG
GCGGCCTGA
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| Protein sequence | MVMARLPARA AWFAFQAQPR LSILIYHRVR PAPDPMRPDD PDVQRFEEQI AWLRHACHVW
PLKEAIRHLY AGTLPRGSVA ITFDDGYADN HDYALPVLLR QGVPATFFIA TGFLNGGRMF
NDTLMEAFAN TEQLAVELPE LGLPHLPLDG VEARCQASRQ VTKGIKHLPP PERAASVELI
LDRLGRPDCG QSPMMTDAQV KALYEQGMEI GAHTVTHPIL RTLDEASARD ELAQSRDYLQ
TLLGAPVGLF AYPNGKPGQD YGPREPGLLQ ELGFKAAVCT APGGANRGRD PYQLPRYTPH
GRTPMRFMTQ LIRCSREEAE AA
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