| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1537 |
|---|
| Symbol | |
|---|
| ID | 4709130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1671337 |
|---|
| End bp | 1672356 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639856004 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_001003106 |
|---|
| Protein GI | 121998319 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCC TGGTCACCGG CGGCACCGGG TACATCGGCA GCCACGCGGC GGTGGCGCTC
ATCGAGGCGG GCCATGAGGC GGTGCTCCTA GACAATCAGC ACAACAGCAC CGGCGCTGTC
GCATCTCGCA TCGGCCGGAT CACCCGCACA TCGCCGGAAC TGATCCGAGG CGATGTACGG
GATGCCTCGA TGCTGGCGGA GTTATTCAGC GCCCGGCGCA TCGACGCGGT GATGCACTTT
GCCGGGCTCA AGGCCGTGGG CGAGAGCGTG CAGCGACCGC TCGACTACTA CGAAACCAAT
GTCGGCGGTA CCATTCGCCT CTGCCAGGCG ATGGAAGCCG CCGGAGTCCG CAAGCTGATT
TTCAGCTCCT CGGCCACCGT ATACGGCGAC CCGGATCGCG TACCAATCCG CGAGGACGCC
CCTACCGGCG GGACGACCAA CCCCTACGGC ACTAGCAAGC ACATGGTCGA GCGGATGCTC
ACCGACCTGA GCACAGCCAA CCCGGGCTGG TGCATCGGGA TCCTACGCTA CTTCAATCCC
GTCGGAGCCC ATAAGAGTGC GCTGATCGGC GAATCGCCGT CCGGCATCCC CAACAATCTC
GTGCCGTATA TCGCTCAGGT GGCCGCCGGG GAGCGCGAGC ACCTGCAGGT CTTCGGCGAC
GACTACCCGA CCCGGGACGG CACGGGGGTG CGGGACTACA TCCACGTCGT CGATCTGGCG
GCCGGGCATG TACGCGCGCT GGAGTACCTT GACGCCCAAC CGGGTCAGCA CGCCTGGAAC
CTCGGCCGCG GCGAGGGGCA CTCGGTCTTG GAGGCCGTGC GTGCCTTCGA GCAAGCGAGC
GGGTGCTCCA TCCCGTACCG GGTTACGGAG CGGCGCCCCG GCGATGTCGC CGAGTGCTGG
GCCGACCCAA GCAAGGCCGA GCGGGAGCTC GGCTGGCGCG CCGAGCGAGG CCTGGCCACG
ATGATGGAGG ATGCCTGGCG CTGGCAGCGT CAGGGCTCGG ATACCGAGAC AGCTTCCTGA
|
|---|
| Protein sequence | MRVLVTGGTG YIGSHAAVAL IEAGHEAVLL DNQHNSTGAV ASRIGRITRT SPELIRGDVR
DASMLAELFS ARRIDAVMHF AGLKAVGESV QRPLDYYETN VGGTIRLCQA MEAAGVRKLI
FSSSATVYGD PDRVPIREDA PTGGTTNPYG TSKHMVERML TDLSTANPGW CIGILRYFNP
VGAHKSALIG ESPSGIPNNL VPYIAQVAAG EREHLQVFGD DYPTRDGTGV RDYIHVVDLA
AGHVRALEYL DAQPGQHAWN LGRGEGHSVL EAVRAFEQAS GCSIPYRVTE RRPGDVAECW
ADPSKAEREL GWRAERGLAT MMEDAWRWQR QGSDTETAS
|
|---|
| |