| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1535 |
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| Symbol | |
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| ID | 4709106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1669082 |
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| End bp | 1670491 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639856002 |
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| Product | sugar transferase |
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| Protein accession | YP_001003104 |
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| Protein GI | 121998317 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTTTT TCGGTCATTA TATCCCGCGC AAGGTTCTTT TACTCGCTGG ATTTGAAGGG
GTGCTGGTAT TCCTCGGCTT GACGGCTATC CTCCCGCTGC AGGCCGGCCT GGTGGGGCCG
TATGGCCTCG AGCAGCTGCC ATTGCAGCTG GAGATGGTGG TTGTAGCCCT GGCCGTGCTT
CTGAGCATGG CGAGTCTGGG TCTTTACGAC ACCGGGCAGA TGGCGATGCG CGATGGGCAG
CTGATGTTAG GGGTCCGGCT GCTGTTGGCC ATGGTTGCGA CCGGGGTCGG CATGTGGGTC
CTACTGGCAC TGATGCCGGC GCTGGCGATC GAGCCGAGCG TGCTGGTGCT TGGCCTGGTG
GTGGCATTCT TCCTACTGCT AATGGGCCGA TTGCTGTCCA GCCGAGTTGT TACTGCGAAT
AAGCTCAAGC CCCGCGTCTT GGTGCTGGGT GTGGGCTCAC GCGCGACGGC GGTGACCGAG
CTCCAGGGCG AGCGCGGCCG TGAGGAACTG CCGTACGTCA TGGTCGGCTA TGTGGCCCCG
CCGGGAACCG ACCATGTTGA CGTCCCCGCC GATGAGGTCA TCGAGCAAGA GCAAGGGACG
TGTCTGCTTG AGCTGTGTCG GCGCCATGGG ATCAACGAAC TAGTTGTGGG GGTTCGCGAC
CGTCGCGGGC AGCTTCCGGT GCGCGATCTG CTGGAATGCA AACTCCACGA GATCTCGGTG
ATCGACCTCA CCCGATTCCT CGAGCGCGAG CGTCGGCAGG TCCGGTTGGA CTCCCTGAAT
ACCAGTTCGT TGATCTTTGG CGAGGGGTTC CGTCAGGACG GGGTGCGCGT CACCGTCAAA
CGAGCCTTTG ATCTGATGGT TAGTCTCGCC CTTCTGTTGG TTACCTTGCC GATCATGCTG
ATTACGGCAC TCGCCATTAA GCTGGAGAGT CCGGGGTCGG TGTTCTTCGG CCAGGAGCGG
GTCGGCATCG GCAACAAGCC GTACCGGCTG TTTAAGTTCC GCAGTATGCG CGAGGACGCT
GAGCAGGACG GTGTGCCGCA GTGGGCGCAG CAGGGAGATG ATCGCATCAC ACGGGTGGGT
GCTGTGATCC GCAAACTTCG CATCGACGAG CTGCCGCAGA TCCTGAACGT CCTCAAGGGC
GAGATGTCTT TCGTCGGGCC GCGCCCCGAG CGGCCGCTGT TTGTTGAACG TCTAGGTGGG
GAGATTCCGC TTTACCGGTT TCGGCACACG GTGGCGCCGG GGATTACCGG TTGGGCGCAG
GTCTGTTATC CCTACGGCGC ATCGATCCAG GATGCACGAG AAAAGCTCCA GTACGATTTG
TACTACCTGA AGAACCATAC CCTGTTTCTG GATCTGGTTA TCCTGATCCG CACCGTGGCC
GTGGTGCTCT TCGGTCAGGG CGCCCGCTAG
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| Protein sequence | MRFFGHYIPR KVLLLAGFEG VLVFLGLTAI LPLQAGLVGP YGLEQLPLQL EMVVVALAVL
LSMASLGLYD TGQMAMRDGQ LMLGVRLLLA MVATGVGMWV LLALMPALAI EPSVLVLGLV
VAFFLLLMGR LLSSRVVTAN KLKPRVLVLG VGSRATAVTE LQGERGREEL PYVMVGYVAP
PGTDHVDVPA DEVIEQEQGT CLLELCRRHG INELVVGVRD RRGQLPVRDL LECKLHEISV
IDLTRFLERE RRQVRLDSLN TSSLIFGEGF RQDGVRVTVK RAFDLMVSLA LLLVTLPIML
ITALAIKLES PGSVFFGQER VGIGNKPYRL FKFRSMREDA EQDGVPQWAQ QGDDRITRVG
AVIRKLRIDE LPQILNVLKG EMSFVGPRPE RPLFVERLGG EIPLYRFRHT VAPGITGWAQ
VCYPYGASIQ DAREKLQYDL YYLKNHTLFL DLVILIRTVA VVLFGQGAR
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