Gene Hhal_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1523 
Symbol 
ID4709172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp1651298 
End bp1652032 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID639855990 
Producthypothetical protein 
Protein accessionYP_001003092 
Protein GI121998305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.302946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTCG CGATGTCATC CCCCTACTCC CGCTACAAGG TCATCCTGGC GACCGAAGAT 
CAGGCGCGGT GCGCCCATTT CCAGTTACGA TACATGGTTT ATTGCGAAAA GAAGCAATAT 
GAATCTTCAA GCCTTTTCCC GGATGGATAT GAACGTGACG ACCACGACAG TCACGCGCTC 
CACCTGCTTC TAAAATACAC ACCACCGGGA TCCCAGACGA ATCGAAACGT GGGCACGATT 
CGTCTAATAA AAGGCGGAAA CAAACCTCTT CCGATCGAGA ACATCTCCGA CCTGAACAGC 
AATGAATTCA CGAATGAATA TAGTGGCGAG CTCTCGCGAC TCGCTATCCA TGAAGTGCCT 
TCAGGCCACG ACACCCTCCC GCTGTTTATC CTCTGCCGTG CTGCACAGCA CCACGCCAGG 
GGGTGTGGGA TATCACGGCT ATACTTCCTC GCTCGACCGG CGCTGGCCCG ACATCTAACC 
CGTAACCATT TACCCTTCGA GCAGGCTGGT TCGCCTTGCT ATCACCGCGG CCGCCGCATA 
CCGTACGCGA TGGACGTAAA TGGCTTTGCT CGGGGGTTAG CGCGGTGGGA AAAGAAACTC 
ATAAAACAGA AATTAGCCCC ATCAAGTAAA ACTGAAACCC TCCACGCCTA CCAACATCCT 
AATAGACTTT CTGACATGGT TCCGAACGGC TGCCTGCAGA CGAAGGGAAT GCCGGAACCC 
AAAAAGGCGA TATAA
 
Protein sequence
MEFAMSSPYS RYKVILATED QARCAHFQLR YMVYCEKKQY ESSSLFPDGY ERDDHDSHAL 
HLLLKYTPPG SQTNRNVGTI RLIKGGNKPL PIENISDLNS NEFTNEYSGE LSRLAIHEVP 
SGHDTLPLFI LCRAAQHHAR GCGISRLYFL ARPALARHLT RNHLPFEQAG SPCYHRGRRI 
PYAMDVNGFA RGLARWEKKL IKQKLAPSSK TETLHAYQHP NRLSDMVPNG CLQTKGMPEP 
KKAI