Gene Hhal_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1484 
Symbol 
ID4709157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1604302 
End bp1604748 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID639855951 
Productcyclase/dehydrase 
Protein accessionYP_001003053 
Protein GI121998266 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.72758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGTA TCAGCCGAAG TGAGCTGGTC CCCTATACCG CGGTCGAGAT CTACGACCTG 
GTCAATGACG TTGCCCGCTA CCCGGAGTTC ATCCCGTGGT GCAAGGAGTG CGAGATCCTC
GAAACCAGTG AGGACACGAC CCGCGCCCGG ATGACCTTTG CCAAGGGCGG GATGGAGAAG
TCGTTCGTCA CTGCCAATCG CCACCAGCGG GGCAAGATGA TCGACATCCG GCTCGTGGAG
GGGCCGTTCC AGCGCCTGGA AGGGTACTGG CGATTCCGGG ATCTGGGCGA GAGCGCGTCG
AAGGTGACCC TGGATATGGA GTTCGAGTTC TCCAACCGGA TCGTGGCCTA CGCGTTCGGC
AAGGTCTTCA CCCAGGTCGC CAACACGCTG GTGGATAGCT TCGCCCGGAG GGCCCGCGAG
GTCTATGGAG AGCGCGATGT CCTCTGA
 
Protein sequence
MPSISRSELV PYTAVEIYDL VNDVARYPEF IPWCKECEIL ETSEDTTRAR MTFAKGGMEK 
SFVTANRHQR GKMIDIRLVE GPFQRLEGYW RFRDLGESAS KVTLDMEFEF SNRIVAYAFG
KVFTQVANTL VDSFARRARE VYGERDVL