Gene Hhal_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1477 
Symbol 
ID4710632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1598501 
End bp1599223 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID639855944 
ProductGrpE protein 
Protein accessionYP_001003046 
Protein GI121998259 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA ACCAGCGACA GAGCACGACC GACGGGCAGC CCGAGACGCG CGATCCGGCG 
CAGGCGACGG CCGAGGCCGC TGAACAGACC CAGGCCACCC AGGCCTCGGC GGCCGTCGAG
GGCGAGCTCC AGGACGGGAG CGCGGATTCC GCCACGGGTG CCAGCTTGTC GGCCGATGAC
GGCGCGGATC CCGAAGCCCT GCGACAACGC GTCGAGGAGC TCGAGAAGGC CCTGGCCGAT
GCCGAGCAGA AGGCCGAGGA GCACTGGGAC CAGGTGCTGC GCATGCGAGC CGAGCTGGAG
AACGCGCGGC GCCGCGCCGA GAAAGACGTC GACCAGGCCA AGCGGCAGGG ACTGGAGAAG
GTCTGCGGGG ATCTGCTGCA GGTCAAGGAC AGCCTGGAGA TGGGCGTGCA GGCGGCCGAA
GACGCCGAGG CGGATCGCGA GAAGCTCCTC GAGGGCTCGC AGCTAACGCT CAAGATGCTC
AACCAGGTCT TTGAGCGCTT CGAGATCGAG GAGATCAACC CGCAGGGCGA GCGTTTCAAT
CCCGACTACC ACGAGGCCAT GGCGGCGCAG CCCAGCGACG AGCAGGAGCC GAATACCGTG
CTCCAGGTGG TTCAGAAGGG CTACCGCCTG CAGGATCGCC TGCTGCGCCC GGCGCTGGTG
GTGGTCGCCA AGAAGGGCGA CGGCGGCGCG GGCAGTGGCG GATCCGTGGA TGAGACTGCC
TGA
 
Protein sequence
MTDNQRQSTT DGQPETRDPA QATAEAAEQT QATQASAAVE GELQDGSADS ATGASLSADD 
GADPEALRQR VEELEKALAD AEQKAEEHWD QVLRMRAELE NARRRAEKDV DQAKRQGLEK
VCGDLLQVKD SLEMGVQAAE DAEADREKLL EGSQLTLKML NQVFERFEIE EINPQGERFN
PDYHEAMAAQ PSDEQEPNTV LQVVQKGYRL QDRLLRPALV VVAKKGDGGA GSGGSVDETA