| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1458 |
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| Symbol | |
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| ID | 4710998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1572622 |
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| End bp | 1574964 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855925 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001003027 |
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| Protein GI | 121998240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCGAC GCTGGGGGCG CAATACGGTC GTCGCGCTGC TGCTCGGCGC GGCTACGGTC
GCTACGGCCA CGGCGGATTC CTTCGTCGCC GAGCAGATCC GGGTCGAAGG ACTGGAGCGG
ATCGACGAGG GCACGGTCTT CAGCTACCTG CCCATCGAGC CCGGTGACCG CGTGGGGAGC
GGCGAGGTGG CGGGGGCGAT CCGTGAACTC TACCGCTCCG GCTTCTTCCG TGACGTCGAG
CTGGCTCGGG ACGGCGATGA GCTAGTGGTG CGGGTGCAGG AGCGGCCGTC GATCGCCCGA
CTCCAGTTCG AGGGCAATGA GCAGATCCGC ACCGAAGACC TGCGCGAAGC CCTGCGCAGC
GCCGGTATGG CCGAGGGCCA GGTGTTCAAC CGTGCGCAGC TGGCCGAGAT CGAGCGGGAG
CTGCGTCAGC AGTACTTTGC CCAGGGCAAG TACGACGTCT CCGTCGAGAG CACCGTCTCC
CCGCTCGAGC GCAACCGGGT GGCGATCCGC ATCGATATCG AAGAGGGCCC CGTCGCCGAG
ATCCGCGAGA TCCACTTGAC CGGTAACGAG GCGTACTCCG ACCGCGAACT GCGCGGCGTG
TTCGAGCAGC AGGCCCGGCG CTGGTGGGCG CCGTGGTCGC AGCGGCACCG CTATGCTCGC
GATCTGCTCG CCAACGACCT CGAGAGCCTG CGCGGGCACT ATCTGGACCG CGGGTTCCTG
AATTTCGCGG TCACCTCCAC CCAGGTCTCC ATCAGCCCCG ATCGGCGCGA CGTCCACGTC
GCCGTGAACG TCGCCGAGGG CGAGCAGTAC GAGATCGGCA GTATTGACGT CCAGGGGCAT
CTGGTCGTGC CTCCGGAGGA GCTGCGCGAG CTGATCGCCC TGGAGCCGGG CGAGCTCTAC
TCGCGCAGTC GCGTGAACGC CGGCTCCTCG GCCATTCGGT CCCGGCTGGC CGAGGAGGGC
TACGCCTTCA GCAATGTCAA CGTCCGCCCC CGGGTGGACG AGGAGGAGCA GGTTGTCGAC
CTGACTTATG TGGTGGATCC CGGTGCGCGG GTCTATGTGC GGCGGATCAA CATCACCGGC
AACCAGCGCA CCCAAGACGA GGTCATCCGG CGGGAGATGC GCCAGCTCGA GGGGGCCCCG
CTGTCCAGTG AGGCGCTGGA GCGCTCGCAG ACGCGGCTCA ATCGGCTCGG GTTCTTCGAC
TTCGTCAACG TCGAAACCCC CCGGGTGCCG GGGGAGGACG ACCGGGTGGA TGTGGACGTC
AGTGTCCAGG AACGGATGAC GGGACAGCTG CAGGCCGGCG TCGGTTACGG CGATGTCCAG
GGGTTGCTGG TCAACTTCTC CGTCTCACAG GACAACCTGC TCGGCACCGG CGACCGGCTG
AGCATGACGG TGAACAACTC CAGTGTCTCC ACCATCTACA ACGTCTCGTA TACGGACCGC
TACCACACCC AAGAGGGCGT CTCCCAGACC CTGTCCGCCG GCTACCGCGA GACCCGCTCC
CGCCGGGCCG ACCTGGCAGA CTACGACCTG ACCTCGGGGC ACGGCTCGGT GGAGTACAGC
GTGCCGTTCA CGGAGGTGGA TCGACTGGCG GCGCGGCTGC GCCTGGAGCG CATCGGTATC
GATACGCGCA GCGATACACC GGACTGGATC AGGGAGTATC TCTCGGACCA GGGCGACGAT
CGTTTCACCA TGGTCAAGCC GCGCCTGTCC TGGAACCGGG ATACCCGAGA CCGCGGGGTG
TTTCCCACCG CCGGCGGCCG GCAGCGGCTG TCCCTGGAGG GGACGATCCC CGGCGATGAT
CTGGAGTTCT ACAAGCTGAC CTACGAGAAC CGCCGCTACT GGCCGCTGCG CTGGCTCGGC
GACCGCACCA CCTTCTCCGT GGAGGGCCAG GTCTCCTACG GCGACGGGTA CGGCGATTCC
AGCTCGCTGC CGTTCTTCGA GAACTACTAC GCCGGCGGCG TGCGCACGGT GCGCGGCTAC
CGTGGCAACT ACCTCGGACC GCGCGAGGAG GGCAGGGACC CGATCGGCGG CAACGCCCGC
GTACTCACCA AGGCGCAGGT CATTTTCCCG CCCACGCCGG AGTCGCAGTC GGTGCGCATG
GCGGCCTTCG TCGATGCCGG GCAGGTCTTC AACACCCGCC TGGATGAGTA CGAGTTCGAC
AGAGAGATCA TTCCGGATGG TCTGGATCGG GTGGACCTGA GCGAGCTGCG GGCCGCGGCC
GGTGTCTCGC TGATCTGGAT GTCGCCGGTG GGGCCGCTGA CCTTCAGTCT GGCCGAACCG
CTGAACGACA CGGGGGACGA CGAGACCGAG ACCTTCCAGT TCTCGCTCGG GACGGAATTC
TAG
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| Protein sequence | MIRRWGRNTV VALLLGAATV ATATADSFVA EQIRVEGLER IDEGTVFSYL PIEPGDRVGS
GEVAGAIREL YRSGFFRDVE LARDGDELVV RVQERPSIAR LQFEGNEQIR TEDLREALRS
AGMAEGQVFN RAQLAEIERE LRQQYFAQGK YDVSVESTVS PLERNRVAIR IDIEEGPVAE
IREIHLTGNE AYSDRELRGV FEQQARRWWA PWSQRHRYAR DLLANDLESL RGHYLDRGFL
NFAVTSTQVS ISPDRRDVHV AVNVAEGEQY EIGSIDVQGH LVVPPEELRE LIALEPGELY
SRSRVNAGSS AIRSRLAEEG YAFSNVNVRP RVDEEEQVVD LTYVVDPGAR VYVRRINITG
NQRTQDEVIR REMRQLEGAP LSSEALERSQ TRLNRLGFFD FVNVETPRVP GEDDRVDVDV
SVQERMTGQL QAGVGYGDVQ GLLVNFSVSQ DNLLGTGDRL SMTVNNSSVS TIYNVSYTDR
YHTQEGVSQT LSAGYRETRS RRADLADYDL TSGHGSVEYS VPFTEVDRLA ARLRLERIGI
DTRSDTPDWI REYLSDQGDD RFTMVKPRLS WNRDTRDRGV FPTAGGRQRL SLEGTIPGDD
LEFYKLTYEN RRYWPLRWLG DRTTFSVEGQ VSYGDGYGDS SSLPFFENYY AGGVRTVRGY
RGNYLGPREE GRDPIGGNAR VLTKAQVIFP PTPESQSVRM AAFVDAGQVF NTRLDEYEFD
REIIPDGLDR VDLSELRAAA GVSLIWMSPV GPLTFSLAEP LNDTGDDETE TFQFSLGTEF
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