| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1453 |
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| Symbol | |
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| ID | 4709210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1565794 |
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| End bp | 1569345 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855920 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001003022 |
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| Protein GI | 121998235 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG ACCCTCCGCC CTTCGTCCAC CTGCGCTTGC ACAGCGAGTT CTCGCTGGTC
GACGGCATCG TCCGAATCAA CGAGGCGGTG TCGGCGGCGC GCGAGGCCGG TATGCCCGCG
GTGGCCATCA CCGATCAGTC GAACCTGTTC GGGATGGTCA AGTTCTACCG CGCGGCGCTG
GCTGCCGGGG TCAAGCCGAT CATCGGTGGC GATGTGTGGC TGGCGGACGA CACCGTGGAG
TTTGGCTACG CCCGGCTGAC GCTGCTGTGC CGGGATCGCG GTGGCTACCG GGCGCTGTCG
CGCCTGCTCA GCCGGGCCTA TCGCGAGGGC GCCTGCGGCG ACATCCCGGT GATCCGGCGG
GAGTGGCTGC AGGCGGATGC TGGCGGGCTG TTGGCCCTCT CCGGCGGCGC CCAGGGCGAT
ATCGGCCAGG CCCTGTTGCG CGGTGACGAG GCCACCGCCC GGCGATACGC CGAGGAACAC
CGCCGGACTT TCGGCGAGGA CGGCTTCTAT CTGGAGCTCC ACCGGCTGGG ACGGCCGGGG
GACGAGCGCC ACCTGCACGC CGCCGTCGCA TTGGCTGCCG ACGAGGATCT ACCGGTGGTG
GCGACCAACG ATGTCCGCTT CATGCGTCCG GAAGACTACG ACGCCCACGA GGTGCGCGTC
TGTATCCATC AGGGGCGCAC GCTGGACGAT CCCAACCGGC CGCGCCACTA CACCGAGCAG
CAGTACTTCG CTGATGCGGC GGACATGGCT GAGCGTTTCT CCGACCTGCC GGAGGCGCTA
GAGACTAGCG TCCGCATTGC CGAGCGCTGC AGCGTCGACC TGGAGCTCGA CACCAACTAC
CTCCCGGACT TTCCGGTCCC CGAGGGGCAC ACGGTCGCCT CGTTCCTGCG CGCCGAGTCC
GAGCGTGGCC TGACACAGCG GCTCGAGCAG CGCGGTCTGG CGGAGGATGA AGACGCCGAC
GAGGTGGAGG CGACCTATCA TCGGCGGCTC GATCACGAGC TGGCGGTCAT TGAGCAGATG
GGGTTCCCGG GGTACTTCCT CATTGTGGCT GACTTCATTC GCTGGGCGCG GGATAACCAC
ATCCCGGTGG GGCCGGGGCG CGGTTCCGGG GCGGGCTCAC TGGTCGCCTA CGCCTTGGGG
ATCACCAACC TCGATCCCCT GCGCTACGAT CTGCTCTTCG AGCGTTTCTT GAACCCCGAG
CGGGTGTCCA TGCCCGACTT CGACGTGGAC TTCTGCATGG AGCGCCGCGA CGAGGTCATC
GAGTACGTCT CGGATCGTTA CGGCGCCGAG AAGGTCTCAC AGATCGCGAC CCACGGCACC
ATGGCGGCGC GGGCCGTGGT CCGCGACGTG GGGCGCGTCT ACGGTCACGC CTTCGGTTAC
ATGGACCGGA TCGCCAAGCT GATCCCCTTC GAGATCGGCA TGACGCTGGA TAAGGCGTTG
GAGCAGGAAG AGGACCTGCG CGCCGAGTAC GACAACGACG AGAACATCCG CGAGTTGATC
GATACCGCGC GCAGCCTCGA GGGGATGGCG CGCAACGTCG GTAAGCACGC CGGCGGTGTG
GTGATCGCCC CCACGGATCT GACCGATTTC TCGCCCCTCT ACCGGGATCC GGAGGAGCGC
GAAGACGCCG AAGCCTGGAA GGTGGCCACC CACTTCGACA AGGACGACGT CGAGGCGGTG
GGCCTGGTCA AGTTCGACTT CCTCGGTCTG CGCACGCTGA CCATCATCGA CTGGACCGTG
CAGGCGGTGA ATCGCATCCT CGAGCAGCGC GGTGAGCGGG CGCTGGATAT CGACGGGATC
CCGCTGGATG ACAGTGCCAC CTTCGATCTG CTCAAGCGCT GCGCCACGAC CGCCGTCTTC
CAGCTGGAAT CCCGCGGCAT GAAGGAGCTG ATCAAGCGGC TCCAGCCCGA CAGCTTCGAG
GATATCGTCG CCCTGGTGGC GCTGTTCCGG CCCGGGCCGC TGCAGTCGGG TATGGTGGAT
GACTTTGTCG AGCGCAAGCA CGGCCGCTCG GCGGTGGCCG GCTACCCGAC CCGGGAACTG
CACCACCCGG ATCTGATGCC GGTGCTCCAG CCCACCTACG GCGTCATCCT CTACCAGGAG
CAGGTGCAGC GGATTGCCCA GGTCCTCGCT GGCTACAGCC TGGGGGAGGC GGACCTGCTT
CGCCGCGCCA TGGGCAAGAA GAAGCCCGAG GAGATGGCCA AACAACGGGC CAAATTCCTC
GAGGGGGCCC AGGCCCGCGG CCTCTCCGAG GGTCACGCCA CCGGCATCTT CGACCTGATG
GAGAAGTTCG CCGGCTACGG CTTCAACAAG TCGCACTCGG CGGCCTATGC GCTGCTCTCC
TATCAGACGG CGTGGCTCAA GTGCCACTTT CCCGCGCCGT TCATGGCCTC GGTGCTGTCC
TCGGACATGG ACAACACCGA CAAGGTGGTG ATCTTTCTCG ACGAGGCCCG GGCCATGGGG
CTCGAGGTGC TGCCGCCGGA TGTCAATCGC AGTGACAAGC CGTTCCGGGC GGTGGACGAG
CGGACCATCG TCTACGGTCT GGGGGCCATC AAGGGGGTCG GGGAGTCGGC GCTCGATGCG
GTGCTCGGCG AGCGCGATGC CCATGGCCCC TTCGGCGATG TCTTCGACCT GTGCCGGCGG
GTGGACACCG GGCGCGCCAA CCGCCGGGTG CTGGAGGCCC TGTGCCGTTC CGGGAGCCTC
GACAGTCTGG TCCCCAACCG CGCCACCGGG ATGGCGCAGA TCCCGGCCGC GCTGGCTGCT
GCCGAGCAGG TGACGCGGGA TCAGGCGGCC GGGCAGACCG ACCTGTTCGG TGGTCCCGCC
GAGGCGGTGA TCGCCCCAGG CGGGGCCGGG GAGGAAGTCG CCGAGGAGCC CGAGTGGCCC
GAGGAGGAGC GCCTGGCCGC CGAGAAGGCC ACCCTCGGCC TCTTTCTCAC CGGCCACCCG
ATCGACCGCT ACGAGCACGA ACTCCCTTAC CTGGCCACCG ATCGCTTGCA ACGTCTGGCC
AGCGGCGCCG GCGGTAGTGG CGGGGATGGG AACGGCGGTC GGGGGCGGTC GGTGACGGCT
GCCGGGCTGG TGGTGGCGTT GCGCGTGCGG AGCACTTCCA CCGGGGGCCG CCTGGCGACC
CTGACTCTGG ACGACCGGAC CGGCCGGATC GAGGTGGTGC TGTTCCCGGA GGCGTTCAGC
AAGAATCGCC ACGCCTTGGA GAAGGACGCG CTACTGGTGG TTCGCGGAAC GCTGGATTAC
GACGACTTCA GCGGCGGCTA CCGGATCACC GGGGAGGAGG TGCTGGACAT TGCCCAGGCA
CGGGAACGGG CGGCCGGACG GTTGGTGATC CCGGTGAGCG CAGCGCACGC TGCCAACGGG
CTGGTGCCGC AACTGCGCCA GTTGCTCAGC AGCCACGCCG GGGACAGCCC GGTCCACGTC
GATTACCGTC ATCCGCGGGC CCGCGGGCGG GTCGTCTTCG GTCGCAACTG GACGGTGACG
CCCAGCGATG AGCTGATCAA GCGGCTCGAG GCCGTGGTCG ACGGACGGGT CGGGGTCGAG
TACCCCCGCT AA
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| Protein sequence | MSEDPPPFVH LRLHSEFSLV DGIVRINEAV SAAREAGMPA VAITDQSNLF GMVKFYRAAL
AAGVKPIIGG DVWLADDTVE FGYARLTLLC RDRGGYRALS RLLSRAYREG ACGDIPVIRR
EWLQADAGGL LALSGGAQGD IGQALLRGDE ATARRYAEEH RRTFGEDGFY LELHRLGRPG
DERHLHAAVA LAADEDLPVV ATNDVRFMRP EDYDAHEVRV CIHQGRTLDD PNRPRHYTEQ
QYFADAADMA ERFSDLPEAL ETSVRIAERC SVDLELDTNY LPDFPVPEGH TVASFLRAES
ERGLTQRLEQ RGLAEDEDAD EVEATYHRRL DHELAVIEQM GFPGYFLIVA DFIRWARDNH
IPVGPGRGSG AGSLVAYALG ITNLDPLRYD LLFERFLNPE RVSMPDFDVD FCMERRDEVI
EYVSDRYGAE KVSQIATHGT MAARAVVRDV GRVYGHAFGY MDRIAKLIPF EIGMTLDKAL
EQEEDLRAEY DNDENIRELI DTARSLEGMA RNVGKHAGGV VIAPTDLTDF SPLYRDPEER
EDAEAWKVAT HFDKDDVEAV GLVKFDFLGL RTLTIIDWTV QAVNRILEQR GERALDIDGI
PLDDSATFDL LKRCATTAVF QLESRGMKEL IKRLQPDSFE DIVALVALFR PGPLQSGMVD
DFVERKHGRS AVAGYPTREL HHPDLMPVLQ PTYGVILYQE QVQRIAQVLA GYSLGEADLL
RRAMGKKKPE EMAKQRAKFL EGAQARGLSE GHATGIFDLM EKFAGYGFNK SHSAAYALLS
YQTAWLKCHF PAPFMASVLS SDMDNTDKVV IFLDEARAMG LEVLPPDVNR SDKPFRAVDE
RTIVYGLGAI KGVGESALDA VLGERDAHGP FGDVFDLCRR VDTGRANRRV LEALCRSGSL
DSLVPNRATG MAQIPAALAA AEQVTRDQAA GQTDLFGGPA EAVIAPGGAG EEVAEEPEWP
EEERLAAEKA TLGLFLTGHP IDRYEHELPY LATDRLQRLA SGAGGSGGDG NGGRGRSVTA
AGLVVALRVR STSTGGRLAT LTLDDRTGRI EVVLFPEAFS KNRHALEKDA LLVVRGTLDY
DDFSGGYRIT GEEVLDIAQA RERAAGRLVI PVSAAHAANG LVPQLRQLLS SHAGDSPVHV
DYRHPRARGR VVFGRNWTVT PSDELIKRLE AVVDGRVGVE YPR
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