| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1435 |
|---|
| Symbol | |
|---|
| ID | 4710722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1547011 |
|---|
| End bp | 1547739 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639855902 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001003004 |
|---|
| Protein GI | 121998217 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.254997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCT ACTGGGCGGT GATACCGGCG GCCGGTGTGG GCCGGCGTAT GGGGGGCGGG
GATCGCCCCA AACAGTATCG CCTGCTGCTG GGGCGGCCGG TGATCGGCTG GGCCCTGGAA
CGGCTGCTCG GTCACCCGAA GGTGGCCGGG GCCGTGGTGG CGTTGGCCGC CGACGACCCC
CACTGGGACG CCCTGGGACT GGACAGGCAG GTGGCGGGGA AACCCGTGCA CCGCGTGGAA
GGGGGGGCAG AGCGGCGTGA TTCGGTTCGG GCCGCGCTGG CCTACCTGGG CGGGATCGCC
AACCCCGAGG ATCGGGTGCT GGTCCACGAC GCCGTACGGC CGTGCCTGAG TGCGGCCGAA
CTGGACCGAC TGATCGACGA GGGGGGGGCA GCCGTCGACG GCGCCCTGCT GGCGACCCCG
GTCCGCGATA CCCTCAAGCG CGCCGATGGC GACTGCGTCG GTGCCACCGT CTCCCGGGAG
GGGCTGTGGC AGGCCCAGAC GCCTCAGCTT TTCCCGCTGC GGCGTCTGTC GGCGGCGCTG
GACGCGGCCT TGGCAGCTGG TGTGGCCGTC ACCGACGAGG CCCAGGCTGT GGAATGGCAT
GACGGCCAGC CGCGGCTGGT CACTGGCGAA GCCGGCAATC TGAAGATCAC CCATCAGGCT
GACCTGGATC TGGCTGCTGC CGTGCTTACG GCGCAGCGGG CGGCCACGGA GAGGGAGCAA
ACCGCGTGA
|
|---|
| Protein sequence | MGRYWAVIPA AGVGRRMGGG DRPKQYRLLL GRPVIGWALE RLLGHPKVAG AVVALAADDP
HWDALGLDRQ VAGKPVHRVE GGAERRDSVR AALAYLGGIA NPEDRVLVHD AVRPCLSAAE
LDRLIDEGGA AVDGALLATP VRDTLKRADG DCVGATVSRE GLWQAQTPQL FPLRRLSAAL
DAALAAGVAV TDEAQAVEWH DGQPRLVTGE AGNLKITHQA DLDLAAAVLT AQRAATEREQ
TA
|
|---|
| |