Gene Hhal_1434 details

Gene Information

• Locus tag: Hhal_1434
• ID: 4710721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1546523
• End bp: 1547014
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855901
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001003003
• Protein GI: 121998216
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.244704
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTCGCA TTGGGCAGGG TTTCGACGTC CACCGGTTCG CCGGCAAGGG CGAGGGTTTT 
CGGCTGGGCG GGGTCGCGGT CCCGTACCAC AAGCGGTTGG AGGCCCACTC CGACGGCGAT 
GTCCTCCTGC ACGCGATCAC CGACGGCCTG CTCGGCGCCT GTGGGATGGG GGATATCGGT 
CGCCACTTCC CGGACGACGA CCCGCGCTGG CGGGACGCCG ACAGCATCGG TCTGCTGGCC 
TCGACGCTGC GTTTGGCTGC CGAGGCCGGA TGGGTGCCGG TGAATGTCGA CGGCACGGTG 
ATTGCTCAGG CCCCTAAGCT GGCTCCCTAT ATCGGTGCCA TGCGCCAGGC CACCGCCGAC 
GCCATGGAGC TGTCGCCCGG GGCGGTGAAC GTCAAGGCGA CGACCAGCGA GCGCCTCGGC 
TTCACCGGCC GGGGAGAGGG GATCGCCGCG ATGGCAGTGG TCCTGGTGGA ATCGGCCCCG 
GGGCGGGGTT GA 

 

Protein sequence

MIRIGQGFDV HRFAGKGEGF RLGGVAVPYH KRLEAHSDGD VLLHAITDGL LGACGMGDIG 
RHFPDDDPRW RDADSIGLLA STLRLAAEAG WVPVNVDGTV IAQAPKLAPY IGAMRQATAD 
AMELSPGAVN VKATTSERLG FTGRGEGIAA MAVVLVESAP GRG