| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1422 |
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| Symbol | |
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| ID | 4709985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1534617 |
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| End bp | 1537214 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855889 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001002991 |
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| Protein GI | 121998204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0501757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGA GGCTGGCGAG CTGGTGCATC GACCACCGGC GATGGATCTT CGCAGCGATG
GCCCTGCTGG CCATCACCCT GGGGGTGCTC ATCCCCCGTA TCCAGATCGA CACCGACCCG
GAGAACATGC TCCCGGCCAA CCAGGCCGAC CGGATCCTCC ACGACCAGGT CCAGGAGCAG
TTCAACCTGC ACGATATGAT CGTCGTCGGC CAGGTCAACG ACGACCATCC AGAGGGGGTC
TTTAACCCGG ACTCCCTCGC CGCGCACTAC CAGCTGACCC GGGCCATCGA GCAGATCGAC
GGCGTGGTCC GACGCGACCT GCTCTCCATG GCCGCCGTGG ACAACGTCGA GCAGGCGGCG
CCGGGGACCA TCGACTACGA CTGGCTGATT CCCACGCCAC CGGAGACCCA AGAGGAGGCC
GACCGGATCC GCGCTGCCGT CGAGCGGCTG CCCATGTACC AGGGGACCCT GGCCTCCGAG
GACGGCACCG CCGCCGGCAT CTTCGTACCC ATCGAGAGCA AGGACCACAG CCACCGCATC
GCCGGTGAGA TCCGCGCCGC CGCCGAGGCG CTCGGCATCG AGGACGAACT CCATATCACC
GGTCAGCCGG TGGCCCAGGA CACCTTCGGC GTGGAGATGT TCCAACAGAT GGCGATCTCG
GCACCGCTGG CCGGGCTGAT CATCTTCCTG GTGATGCTCT TCTTCTTCCG CAACATCCCC
CTGGTCATCG CCCCCATGCT GCTGGCCATG ACCACGGTGA TCGCCACCAT GGGGTTGCTC
ATCGGCACTG GCTTCACGGT GCACATCATG AGCTCGATGA TCCCCATCTT CCTGATGCCC
ATCGCCGTGG TGGCCTCCAT CCACGTCCTG TCGAACTTCG CCGACCGCTA CCGACCCGGC
GATGACCCGC GGCGCGTGAT GGCCGGGGTC ATGGAGCGGC TCTACAAGCC GGTGCTGTTC
ACCGCGCTGA CCACCGGGGT CGGGTTCGCC TCACTGATGT TCACGCCGAT CCCGCCGGTG
CAGGTGTTCG GCGGCTTTAT CAGCTTTGGG GTGCTCCTCG CCCTGGTACT GACCCTGACC
TTCATCCCGG CCTACGTCGG CAGCCTGTCC CGCAAGAACC TCGACCGCAT GGCCGAGCGG
GTCCGGCGCC AGCAGAACGA CACCGAGGGG TCACGGATGT GCGCCGTGCT CGATACCACC
GGCCGCCTGG CCGTGCGTGG CCGCGCCTGG ATCGTCGGCG GACTGGTGGT CCTGGTAGCT
GTCGCGGTTT TCGGGATCAC GCAGATCCAG ATCAACGACA ACCCGACCCG CTGGTTCAAG
GCGAACCACG ATATCCGCGT CGCCGACGAG GTCCTCAACG ACCGCTTCGC CGGGACCTAC
GAGGCGTATA TCCGACTGCG CCAGACCGGC CTGGAGGAGG TCGCCGAACG CCTCGATGCC
GAGGCGCAGG AGATCCTGGA GGCTGCGGAA GACGACGGTT TCGAGCTGCA AGAGCGCTGG
GAGCGGCTCA ACGCCGAAGC CGCCGACGAG GGACCGATCG GCGATCGAAT GGAGGCACTG
GCCACCGAGA TCGACGACCT GCTCTTCGAG GTCGATCTGG ACGAGGCCGA GCACTGGGAG
GCCCTGCTCG ATGCCGTGGA AGCGGCACGC ACCGAGACCC GCGCCTTCCA GAGTCCGGAG
CATCTGGGCT GGATGGCCGA ACTCCAGGAG CACCTGGTCG AGGCCGGTGT GGTCGGCAAG
GCCAACTCCC TGGCCGACCT AGTGCGGACC GTCAACCGCG AGCTGATCAG CGGCGAGCCG
GAGGACTACC GGTTGCCGGG GACCTCCGGC GGCGTCTCCC AGGCGATCCT CAGCTTCCAG
GGCTCCCACC GCCCCCACGA TCTGTGGCGC TTCGTGACCC CGGACTACAC CGAGGCCAAC
GTCTGGCTGC AGCTGCCCAG CGGCGATAAC CAGGATATGG CCCGGGTCCT CGACGCCGTG
GATGCGTTCG TGGCCGAGCA CCCCCCGCCG GAGGGCGTGG AACTCGACTG GGCTGGCGCC
ACCTACATCA ACCTGGTCTG GCAGGGGGAG ATGGTCGAAG GGATGCTCTT TGCCCTGCTC
TCCGCCTTCG CCGTGGTGCT GGTGATGATG ATCGCCCTGT TCCGCTCCCT GACGCTGGGT
GTACTGGCGA TGCTGCCGCT GACGGTCACC ATCGCCTTCA TCTACGGCGT CATGGGGCTG
GTGGGCAAGG ATTACGATAT GCCGGTGGCG GTGCTCTCGT CGTTGTCGAT CGGCCTGTCG
GTCGACTTCG CCATCCACTT CATCCAGCGC CTGCGCATGG CCCTCGCCGA GACCCGAGAA
TGGCGCAGCG CCCTGACCCA GGTCTTCCGC GAGCCGGCGT GCGCCATCAC GCGCAACGCC
ATCGTCATCG CGGTGGGCTT CCTGCCGCTA CTCGCCGCCC CCCTGGTGCC GTACATCACC
GTGGGCACCT TCCTGGCCAG CATCATGGCG GCCTCGGCGC TGGTGACCCT GCTGGCCCTG
CCGGCGATCG TCGCCTTCGC CCCCCGGCTT TTCTTCCCCC GCGCCCAGCA AACGGCGCAA
CCGCAACAGG AGGTATAA
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| Protein sequence | MGERLASWCI DHRRWIFAAM ALLAITLGVL IPRIQIDTDP ENMLPANQAD RILHDQVQEQ
FNLHDMIVVG QVNDDHPEGV FNPDSLAAHY QLTRAIEQID GVVRRDLLSM AAVDNVEQAA
PGTIDYDWLI PTPPETQEEA DRIRAAVERL PMYQGTLASE DGTAAGIFVP IESKDHSHRI
AGEIRAAAEA LGIEDELHIT GQPVAQDTFG VEMFQQMAIS APLAGLIIFL VMLFFFRNIP
LVIAPMLLAM TTVIATMGLL IGTGFTVHIM SSMIPIFLMP IAVVASIHVL SNFADRYRPG
DDPRRVMAGV MERLYKPVLF TALTTGVGFA SLMFTPIPPV QVFGGFISFG VLLALVLTLT
FIPAYVGSLS RKNLDRMAER VRRQQNDTEG SRMCAVLDTT GRLAVRGRAW IVGGLVVLVA
VAVFGITQIQ INDNPTRWFK ANHDIRVADE VLNDRFAGTY EAYIRLRQTG LEEVAERLDA
EAQEILEAAE DDGFELQERW ERLNAEAADE GPIGDRMEAL ATEIDDLLFE VDLDEAEHWE
ALLDAVEAAR TETRAFQSPE HLGWMAELQE HLVEAGVVGK ANSLADLVRT VNRELISGEP
EDYRLPGTSG GVSQAILSFQ GSHRPHDLWR FVTPDYTEAN VWLQLPSGDN QDMARVLDAV
DAFVAEHPPP EGVELDWAGA TYINLVWQGE MVEGMLFALL SAFAVVLVMM IALFRSLTLG
VLAMLPLTVT IAFIYGVMGL VGKDYDMPVA VLSSLSIGLS VDFAIHFIQR LRMALAETRE
WRSALTQVFR EPACAITRNA IVIAVGFLPL LAAPLVPYIT VGTFLASIMA ASALVTLLAL
PAIVAFAPRL FFPRAQQTAQ PQQEV
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