| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1404 |
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| Symbol | |
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| ID | 4711148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1517610 |
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| End bp | 1518761 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855871 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_001002973 |
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| Protein GI | 121998186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CCCCCAAGCG AATCGTCGTC GGCCTCTCGG GTGGAGTGGA CTCCGCCGTT
GCGGCACTGC GCCTGGTCCG CGCCGGTCAC GAGGTGATCG GGCTGTTCAT GAAGAACTGG
GAAGACGACG ACACCCTGAC CCAGTGCTCC GCCGAGGACG ACATCGCCGC CGCGGTGGCC
GTGGCCGAGC ACCTGGGCAT CCCCATCCGC CGGGTGAATT TCGCCGCGCA CTATCGGCGA
GAAGTCTTCG AGCACGCCCT GCAGGAACTG CGCGCCGGGC GCACGCCGAA CCCCGATATC
CTGTGCAACC GGCACGTCAA GTTCGACCGT TTCCTGCGTC ACGCCCGGGA GCAGTTCGAG
GCCGACGCCG TCGCCACCGG CCACTACGCC CGAACCGGCC GCGCCGGCGA CGGCGAGCCG
GCGCTACTGC GCGGCATCGA TCCGAGCAAG GATCAGAGCT ACTTCCTCGC CGGCGTCCCG
CGCCAGGCAC TGGACGCCGT GCGCTTTCCC CTGGGCGACA GCACCAAGGA GACGGTCCGC
GCCGAGGCCC GATCGGCGGC GCTACCCAAC TTCGACCGCC CGGACAGCAC CGGGATCTGC
TTTATCGGCG AGCGGGATTT CACGCAGTTC ATGCAGCGCT ACATCGACCC CCACCCCGGG
CCGATCCTCA CCGAGGACGG GCGGGAAATC GGCCGCCACT GCGGGCTGGC CTTCTACACC
CTGGGGCAAC GCCGCGGGCT GGGCATCGGC GGCGATCGCA ACCGGGACTC CTCCGCACCC
TGGTATGTGG CCGGCAAGGA CGCGCGGCGC AACGCACTGT TCGTCGTCCA GGGCCACGAC
CATCCCTGGC TCCAGAGTGC CGCGGTCTCG ACCGAGCCCT TCCATTGGCT TGCGCCGGTG
CCCGCCGAGG GGGCCCGGCT GCATGCTCAG GTGCGCTACC GCCAGGAGCC GCAGGCCGGC
CAGCTGTCCC ACGCTGAAGG CGGTCGGGTG GTTTTCCGTT TCGATGAACC CCAGCGGGCG
GCGACCCCGG GGCAGCACCT GGTTCTCTAT GATCGTGAAC AGTGCCTGGG TGGGGGGGTC
ATCGACACCG CGCACCCGGC CGACCGGAGC GCCCCGCCGG CCCTGCAGAC GCAATCGACG
GAGGTGGTGT GA
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| Protein sequence | MTESPKRIVV GLSGGVDSAV AALRLVRAGH EVIGLFMKNW EDDDTLTQCS AEDDIAAAVA
VAEHLGIPIR RVNFAAHYRR EVFEHALQEL RAGRTPNPDI LCNRHVKFDR FLRHAREQFE
ADAVATGHYA RTGRAGDGEP ALLRGIDPSK DQSYFLAGVP RQALDAVRFP LGDSTKETVR
AEARSAALPN FDRPDSTGIC FIGERDFTQF MQRYIDPHPG PILTEDGREI GRHCGLAFYT
LGQRRGLGIG GDRNRDSSAP WYVAGKDARR NALFVVQGHD HPWLQSAAVS TEPFHWLAPV
PAEGARLHAQ VRYRQEPQAG QLSHAEGGRV VFRFDEPQRA ATPGQHLVLY DREQCLGGGV
IDTAHPADRS APPALQTQST EVV
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