| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1400 |
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| Symbol | |
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| ID | 4711122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1512168 |
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| End bp | 1514438 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855867 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001002969 |
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| Protein GI | 121998182 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGTA AAGAGTTAGA GTTCACGCTC AATCTGGCTT TCAAGGACGC ACGGGAGAAG
CGCCACGAGT TCCTCACCGT TGAGCACCTC TTGCTGGCCT TGACCGACAA CCCCGCTGCC
TCGCAGGTGC TCAAGGCCTG TGGCGCCGAT CTCGAGCGGC TGCGGGGGGA GTTACAAGCC
TTCCTGTCCG AGACCACGCC GCTGCTCCCG GTAAACGACA GCCGCGAGAC GCAGCCGACG
CTCGGGTTCC AGCGGGTCCT GCAGCGCGCC ATCCTCCACG TGCAGTCCTC CGGCAAGCGT
GAGGTCACCG GAGCCAACGT ACTGGTGGCC ATCTTCAGCG AGCAGGAGTC CCAGGCGGTC
TACTTTCTGC ACAAGCAGAA CATCTCTCGC CTGGACGTGG TGAACTACAT TTCCCACGGC
ATCTCCTCGG TCGGGGGTGA AGAAGACATG GGCAAGGAAG AGAGTGGCCC GGCGGATGAA
GAGGGCGCAG CGGAGCCGAC CCAGGGCGGG TCGCCGCTGG AGCAGTACGC CACCAACCTG
AATCAGCGGG CCCGCTCCGG GCAGATCGAC CCGCTGATCG GTCGTCGTTA CGAGATCGAG
CGGACGGTCC AGGTGCTCTG CCGGCGCCGC AAGAACAACC CGCTGTTCGT CGGCGAGGCC
GGTGTCGGCA AGACCGCCAT CGCCGAGGGG CTGGCCAAGC AGATCGTCGA GGGCGAGGTG
CCGGAGGTGC TCCGGGAGAG CACTATCTAC TCGCTGGATC TCGGTGCCCT GGTGGCCGGT
ACCAAGTACC GTGGCGACTT CGAGAAGCGC CTCAAGGCGT TGCTCCACCA GCTCAAAAAG
GACAGCGGCT CCATCCTGTT CATCGACGAG ATCCACACCA TCATCGGAGC TGGGTCGGCC
TCCGGTGGGG TGATGGACGC CTCGAACCTG ATCAAGCCGA TGCTCGCCTC CGGCGAGCTG
CGCTGCATCG GATCGACCAC GTATCAGGAG TACCGCGGTA TCTTCGAAAA GGATCGGGCC
CTGGCCCGGC GCTTCCAGAA GATCGATGTC AGCGAGCCGT CGGTGGAGGA TACCGTCCAG
ATCCTCAAGG GGCTGAAGAG CCGCTTCGAG GAGCACCACA ATGTCCGCTT CACGGAGCCA
GCCCTGCAAG CGGCGGCGGA GTTGTCGGCC AAGTACATCA ATGACCGGCG CCTGCCCGAC
AAGGCCATCG ACGTCATCGA CGAGGCCGGC GCCCGGCTGC GCCTGCGCCC GCGCTCGAAG
CGGCGCAAGA CGGTGGGCCT GCCGGATATC GAGTCGATCG TGGCGAAGAT CGCGCGGATC
CCCCCCAAGC GGGTCTCCAG CCAGGACATG AAGGTGCTCG AGAACCTCGA GGGCGAGCTC
AAGGGACTGA TCTTCGGTCA GGACGAGGCC ATCGAGAGCC TGGCGTCGAC CATCAAGATG
TCTCGGGCCG GGCTGGGTAC GCCGGATCGG CCGGTGGGCA CCTTCCTGTT TGCCGGTCCC
ACCGGCGTGG GCAAGACCGA GGTGACCCGA CAGTTGGCCG AGGTGACCGG TGTCCAGATG
ATCCGCTTCG ACATGTCCGA GTATATGGAG CGGCACACCG TCTCGCGGCT GATCGGTGCC
CCTCCGGGGT ACGTCGGCTA CGACCAGGGC GGGCTGCTCA CCGAGGAGGT CATCAAGCAC
CCGCACTCGG TACTGCTGCT CGACGAGATC GAGAAGGCCC ATCCGGACGT GTTCAACCTG
CTGCTGCAGG TGATGGATCA CGGCACGCTG ACGGACAACA ACGGCCGCGA GGCGGACTTC
CGCAACGTGG TGCTGGTGAT GACCACCAAC GCCGGGGCTG AGGAGATGAG CAAGCGCTCG
ATCGGCTTCA CCAACGAGAG CGACACCCAG GACAGCATGG AGGCGATCCG GCGGACCTTC
TCCCCGGAGT TCCGCAACCG CATCGATGCG GTGGTGCAGT TCCAGCCCCT GGGTCAGGAC
ACCGTGCAGC GGGTGGTCGA CAAGTTCATC CGCGAGCTGT CGGTGCAGCT GGCCGAGAAG
CGTGTCACCC TGGTCGTCGA CGGCGACGCG CGACGGTGGA TCGGGGAGAA GGGCTATGAC
CCGCAGATGG GTGCACGCCC GATGGCCCGA GTCATCCAGC AGCACATCAA GAAGCCGCTG
GCCGAGCAGC TGCTCTTCGG CGAGCTGACC GGTGGTGGCG AGGTCGAGGT CACGGTCGAG
GATGGCGAGC TGACCATCCA CGTCCGGGAG AGGGATACCG AGGGGGCGTA G
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| Protein sequence | MLSKELEFTL NLAFKDAREK RHEFLTVEHL LLALTDNPAA SQVLKACGAD LERLRGELQA
FLSETTPLLP VNDSRETQPT LGFQRVLQRA ILHVQSSGKR EVTGANVLVA IFSEQESQAV
YFLHKQNISR LDVVNYISHG ISSVGGEEDM GKEESGPADE EGAAEPTQGG SPLEQYATNL
NQRARSGQID PLIGRRYEIE RTVQVLCRRR KNNPLFVGEA GVGKTAIAEG LAKQIVEGEV
PEVLRESTIY SLDLGALVAG TKYRGDFEKR LKALLHQLKK DSGSILFIDE IHTIIGAGSA
SGGVMDASNL IKPMLASGEL RCIGSTTYQE YRGIFEKDRA LARRFQKIDV SEPSVEDTVQ
ILKGLKSRFE EHHNVRFTEP ALQAAAELSA KYINDRRLPD KAIDVIDEAG ARLRLRPRSK
RRKTVGLPDI ESIVAKIARI PPKRVSSQDM KVLENLEGEL KGLIFGQDEA IESLASTIKM
SRAGLGTPDR PVGTFLFAGP TGVGKTEVTR QLAEVTGVQM IRFDMSEYME RHTVSRLIGA
PPGYVGYDQG GLLTEEVIKH PHSVLLLDEI EKAHPDVFNL LLQVMDHGTL TDNNGREADF
RNVVLVMTTN AGAEEMSKRS IGFTNESDTQ DSMEAIRRTF SPEFRNRIDA VVQFQPLGQD
TVQRVVDKFI RELSVQLAEK RVTLVVDGDA RRWIGEKGYD PQMGARPMAR VIQQHIKKPL
AEQLLFGELT GGGEVEVTVE DGELTIHVRE RDTEGA
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