| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1381 |
|---|
| Symbol | |
|---|
| ID | 4711347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1488691 |
|---|
| End bp | 1489488 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855848 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001002950 |
|---|
| Protein GI | 121998163 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGA CCATCACCGT CTCCGAGCTC GCCGTGCTGC TGGTGGAGCC CTCGGACGTG
CAGCGCCGCA TCCTCGCCGA GAGCCTGCGC GAGGCCGGCA TTCACCACCT GGAGGCGACC
GCCTCGCTGG CCGAGGCCCG CGAACGCTTC CGGGCCATGC GGCCGGATCT GGTGATCAGC
GCCATGTACC TGCCCGACGG CACCGCCGAG GACTTCCTGC TGGAGCTGCG CAACGACCCG
GCCACGGCCG ATCAGCCCTT CATGCTGGTC TCCAGCGTGC GCGACCGCCA GCAGCTAGAG
ACCCTGCGCC AATCCGGGGT CATGGCCATC CTGCCCAAAC CGTTCTCCGC CGAGGACTTG
GACCGGGCGG TGCGCGCCAG CGTCGATCTG CTCAGCGAGC AGGAGTTCGA ACTCGACCAC
GTGGACATCA CCACCCTGCG CTTCCTGCTG GTGGACGACA GCCGCATGGC CCGCAGCTAC
CTGCGCCGGG TCTTCGAGAC CCTGGGCGCG GATCACTTCG TCGAGGCCAG CAATGGCCGG
GAGGCGGTGG AGGCGCTGCA CCGATCGAGC TTCGATCTGA TCGTCACCGA CTACAACATG
CCGGAGATGG ACGGCGCCGA GCTGGCCCGC TACGTCCGCC AGCAGCCGGA GTTCCTCCAC
CTGCCCATCC TCATGATCAG CTCGACGCCG GATCAGGCCA GCCTGGCGGG GGTCGCCCAG
GCCGGGGTGG ACACCATCTG CGACAAGCCC TTCGAGCCCG AGACAGCCCG CCAGACGCTG
CTGCGCCTGT TCAGCTAG
|
|---|
| Protein sequence | MTPTITVSEL AVLLVEPSDV QRRILAESLR EAGIHHLEAT ASLAEARERF RAMRPDLVIS
AMYLPDGTAE DFLLELRNDP ATADQPFMLV SSVRDRQQLE TLRQSGVMAI LPKPFSAEDL
DRAVRASVDL LSEQEFELDH VDITTLRFLL VDDSRMARSY LRRVFETLGA DHFVEASNGR
EAVEALHRSS FDLIVTDYNM PEMDGAELAR YVRQQPEFLH LPILMISSTP DQASLAGVAQ
AGVDTICDKP FEPETARQTL LRLFS
|
|---|
| |