Gene Hhal_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1378 
Symbol 
ID4711354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1485906 
End bp1486364 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID639855845 
Producthypothetical protein 
Protein accessionYP_001002947 
Protein GI121998160 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAG AGACGGACAA CGCTGCCGGG ATCGGCCTCG AGCACGCCCG GCGGCTCTTT 
CGGGGCTCGC CCCACGGGGC CCTCATCGGC CTGGAGCTGG TGGAACTCGG TGCCGAGTAC
CTGATCGCCC GGGTGCCGTA CCGCCCGGAG CTGATCGGCA ACCCCGAGAC CGGGCACATC
CACGGCGGGG TGATCACCAC CTTGATCGAT CAGAGCTGCG GGGCGGCCGT GCTGATGGCC
ACCGGCCCGG AGGAGCGTAT CGTTACCCTC GATCTGCGGG TCGATCACCT GCGGCCGGCG
GCCCCGGGGC GGGATGTCTA CGCCCGCTGC GAGTGCTACC GCCTGGCCAA CGAGGTGGCC
TTCGCCCGGG CCGTCGCCTA CGAGGATGAC CCGGCGGAGC CCTTCGCTAC CAGCATGAGC
GCCTTCATGC GCCTGCGCGA GGGGGTGGGG CGTGGCTGA
 
Protein sequence
MTAETDNAAG IGLEHARRLF RGSPHGALIG LELVELGAEY LIARVPYRPE LIGNPETGHI 
HGGVITTLID QSCGAAVLMA TGPEERIVTL DLRVDHLRPA APGRDVYARC ECYRLANEVA
FARAVAYEDD PAEPFATSMS AFMRLREGVG RG