Gene Hhal_1376 details

Gene Information

• Locus tag: Hhal_1376
• ID: 4711356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1483363
• End bp: 1485453
• Gene Length: 2091 bp
• Protein Length: 696 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855843
• Product: oligopeptidase B
• Protein accession: YP_001002945
• Protein GI: 121998158
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1770] Protease II

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.175482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAGT CGACGCCGCA GCCGCCCCGG GCCGCCGAGA CCCCCGAGGT GATCGAACGC 
TTCGGGGTGC GCCGCACCGA CCCCTACGCC TGGTTGCGCG ATCCGAACTG GCGGGAGGCG 
ATGCTCGACC CGCAGCAGCT GCAGTCGTCC ATCCGTGCCC ACCTGGAGGC CGAGAACGCC 
TACACCGAGG CGGTGCTGCA GCCGGTGGCC GGGCTGCGTG AGCGGCTTTT CGCCGAGCTG 
CGCGGGCGGA TCAAGGAGGA GGACGCCTCG GTCCCCGATC CCGACGGCGC CTACGAGTAC 
TATGTCCGCT TCCGCGCCGG CGGGCAGCAC CCGGTGGCCT GCCGTCGGCC TCGCGGGGGC 
GGGGCCGAGG AGGTGCTGCT CGATGGCGAC GCCCTGGCCG AGGGGCACGC TTACTTCCAG 
CTCGGCGACT GGGCGCACAG CGACGACCAC CGCTACCTGG CCTACGCCGT GGATACCAGC 
GGTGCCGAGG CGTACACCAT TCGCTTTCGG GATCTTGCCG GTGGGGCCGA TCTGCCGGAT 
GCCCTGGAGC AGGCCCGCGG CGACTTCGTC TGGGCCGGCG ACGGCCAGAC CCTGCTCTAT 
ACGGTGCTCG ATGACGAGCA CCGGCCGCGC TGGGTTTATC GCCACTGTCT TGGCACCGAT 
TCGGCCAGCG ACGCGCTGGT CTACGAGGAG ACTGATCCGG GGTTCTTCGT CGGCCTGGAC 
CGCACCGAGA GCCGGCGCTA CGTGCTCATT GAGACCCACG ATCACACCAC CTCGGAGGTC 
CACGCTGCGC TGGCCGACGA CCCGGCGGCC GGCTTTCGCT GCCTCATGCC CCGCGAGCGC 
GGGGTGGAGT ACGCAGTCAG CGACAGCGGC GACCGCTGGC TGATCCTGAC CAACCGGCAG 
GCGCAGGACT TCCGCATCGT CCAGGCGCCC CTGGAAGCCC CGGAACCGGG GCATTTCGAA 
GAGGTCGTGC CCCACCGCCC CGGGGTGCTG ATCCACGATA TGCTGCTGTT CCGGGAGCAC 
CTGGTGCGCC TGGAGAGCGA GGATGCGCTG CCGCGCATCG TGGTCCGTCG TCTGGGCGAC 
GGCGCCGAGC ACAGCGTCGC CTTCGACGAG GCGGCCTACG CGCTGGGCAT CTCGGGCGGC 
TTCGAGTACG ACACCACCAC CCTGCGCTTC AGCTACTCGT CGTTGACGAC GCCGGGCCGG 
GTCTACGACT ACGACATGGA GACCCGGGTG CGCAGCTTGC GCAAGGAGCA GGAGATCCCT 
AGCGGGCACG ATCCGGCCGC CTACGTGGCG CACCGCATCG AGGCCACGGC CCCGGATGGT 
GAGCGGGTGC CGATCTCGCT CGTCCACCGC GCGGATCTGC AGCCGGGCCC GGATACCCCG 
CTGTGGCTCA ACGGCTACGG TGCCTACGGC ATCAGCCAGC CGGCGGCCTT CTCGCCGCAT 
CGACTGTCGC TGGTCGACCG CGGCTTCGTC TTCGCCATTG CTCACGTGCG CGGCGGCAAG 
GAACGCGGCT ACCGCTGGTA CGACGCCGGC AAGCTCGAGC ACAAGCCGAA TACCTTCAGC 
GACTACATCG CCTGCGCCGA GCACCTGATC GACGCCGGTT ACACCGGGGC CGGGCGGGTG 
GTGGTCCACG GCGGCTCGGC CGGCGGCATG CTCGTCGGCG CCGTGCTCAA TCAGCGCCCG 
GAGCTCTTCG GGGCCGCGGT GGCGGATGTG CCCTTTGTGG ATGTGCTCAA CACCATGAGC 
GACCCGAGCC TGCCGCTCAC CCCGCCGGAG TGGCCGGAGT GGGGCAACCC CATCGAGGAC 
GAGCGGGCTT TCCATACCAT CCTCGGCTAC TCGCCCTACG AGAACATCCA GGCGCAGGCC 
TATCCGCCCA TCCTGGCCAC CGCCGGGGTC TCGGATCCGC GGGTGACCTA CTGGGAGCCG 
GCCAAGTGGG TGGCCCGTCT GCGTGCCCTG AAGACCGACG ACAACCCGCT GCTGCTGCAG 
ACCAACATGA GCGCCGGCCA CGCCGGGCCG GGCGGTCGCT TCGACTACCT GGAGGAGGCG 
GCCTTGCGCT TTGCCTTCGT GCTCTGGGTC TTCGGCCGGG CCGTGGGCTG A 

 

Protein sequence

MTESTPQPPR AAETPEVIER FGVRRTDPYA WLRDPNWREA MLDPQQLQSS IRAHLEAENA 
YTEAVLQPVA GLRERLFAEL RGRIKEEDAS VPDPDGAYEY YVRFRAGGQH PVACRRPRGG 
GAEEVLLDGD ALAEGHAYFQ LGDWAHSDDH RYLAYAVDTS GAEAYTIRFR DLAGGADLPD 
ALEQARGDFV WAGDGQTLLY TVLDDEHRPR WVYRHCLGTD SASDALVYEE TDPGFFVGLD 
RTESRRYVLI ETHDHTTSEV HAALADDPAA GFRCLMPRER GVEYAVSDSG DRWLILTNRQ 
AQDFRIVQAP LEAPEPGHFE EVVPHRPGVL IHDMLLFREH LVRLESEDAL PRIVVRRLGD 
GAEHSVAFDE AAYALGISGG FEYDTTTLRF SYSSLTTPGR VYDYDMETRV RSLRKEQEIP 
SGHDPAAYVA HRIEATAPDG ERVPISLVHR ADLQPGPDTP LWLNGYGAYG ISQPAAFSPH 
RLSLVDRGFV FAIAHVRGGK ERGYRWYDAG KLEHKPNTFS DYIACAEHLI DAGYTGAGRV 
VVHGGSAGGM LVGAVLNQRP ELFGAAVADV PFVDVLNTMS DPSLPLTPPE WPEWGNPIED 
ERAFHTILGY SPYENIQAQA YPPILATAGV SDPRVTYWEP AKWVARLRAL KTDDNPLLLQ 
TNMSAGHAGP GGRFDYLEEA ALRFAFVLWV FGRAVG