| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1370 |
|---|
| Symbol | |
|---|
| ID | 4711420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1478579 |
|---|
| End bp | 1479112 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639855837 |
|---|
| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
|---|
| Protein accession | YP_001002939 |
|---|
| Protein GI | 121998152 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC GACTGCTCCT CCCGCTCCTG CTGACCCTGC CGGTCCTGGG GCTACTGTAT
GTGGGGCTGA CTCTGGATTC GCGCAGCCTG CCCTCACCGC TGGTGGGCAA ACCAGCACCG
GACTTCGAGC TGGAGTCGCT GCGCGATGCC GGCGTCACCC TGACCCGGGA CGATTTCATC
GGAGAGATCG CCCTGGTCAA CGTCTGGGCC TCGTGGTGTG ACAGCTGCCG CCACGAGCAT
ACCTACTGGC GGCAGCTGGC CGACCGCGGG ATCCCGATCC ACGCCTTCAA TTATCGCGAC
AGCCGAGAGA ATGCCCATCG CTATCTGGAG TTCTTCGGCG ACCCGTTCCG CGAGATCGCC
TACGACCCGC GGGCCGAGGC CGGCATGGAG TGGGGCGTGT ACGCCACCCC CGAGACCTAC
GTACTCGATG CCGAAGGCAT CATCCGGCAC AAGCACATCG GACCGGTCAA CGCCGAGGTG
CTGCGTAACG ACATCCTGCC CTTGATCGAG GAACTGGAGG CAGAGCGGTC ATGA
|
|---|
| Protein sequence | MNKRLLLPLL LTLPVLGLLY VGLTLDSRSL PSPLVGKPAP DFELESLRDA GVTLTRDDFI
GEIALVNVWA SWCDSCRHEH TYWRQLADRG IPIHAFNYRD SRENAHRYLE FFGDPFREIA
YDPRAEAGME WGVYATPETY VLDAEGIIRH KHIGPVNAEV LRNDILPLIE ELEAERS
|
|---|
| |