| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1369 |
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| Symbol | |
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| ID | 4711343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1476558 |
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| End bp | 1478582 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855836 |
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| Product | cytochrome c-type biogenesis protein CcmF |
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| Protein accession | YP_001002938 |
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| Protein GI | 121998151 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGGTG AGCTCGGCAA TTTTGCCCTG ATCCTGGCCT TCTGCCTGGC CGTCATCCAG
TCGATCCTGC CGCTGGTCGG GACCGCCACC GGCGACGCCC GGCTGATGAA CTCCGGCCGC
TCGCTGGCCG TCGGGCAGTT CGTCTTCCTG CTCGCCGCCT ACCTGATCCT GACGGCGGCC
TTCGTGACCA ACGACTTCTC CATCCGCTAC GTGGCCGAGA ACTCGGCCAC CGCGCCGCCG
CTGGTCTATA AGATCACCGG CGTGTGGGGG GGCCACGAGG GCTCGATGCT CTTCTGGGTC
CTGACCCTGA GCGCCTGGAC CGTCGCCGTC GCGGTGTTCA GCCGCGCCCT GCCCCGCGAG
ATGCTGGCGC GGGTGCTGGC GGTGCTCGGC ATGGTGGCGG TGGCGTTCAT CGCGTTCACC
GCGCTCACCT CGAATCCCTT CGAGCGGATC TTCCCGGCAC CCACCGAGGG CACGGACCTG
AACCCGCTGC TCCAGGATCC GGGGATGATC ATCCACCCGC CGCTGCTGTT CATTGGCTAC
ACCGGCCTCG CGGTGGCCTT CGCCTTCGCC GTAGCGGCGC TGATCGGCGG TCGCCTGGAC
GCCGCCTGGG CGCGCTGGTC GCGGCCGTGG ACCACCGCCG CCTGGGGCTT CCTGACCCTG
GGCATCGGCC TCGGCTCCTG GTGGGCCTAC TATGAGCTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TGGAGAACGC CTCCCTGCTG CCCTGGCTCA CTGCCACTGC CCTGATCCAC
TCGCTGGCGG TGACCGAGAA ACGGGGCGGG TTCAAGGTCT GGACCGTGAT GCTGGCCATC
GTCAGCTTCG CGCTCACCAT CCTCGGCGGG TTCATCGTCC GCTCTGGCGT GATCACCTCG
GTCCACGCCT TCGCCACGGA CCCGGACCGA GGCGTGTTCC TGCTGGCGAT CCTCGCCGTC
ACGCTCCTCG GCTCCCTGGC GCTCTATGCC TGGCGGGCCC CGAAGGTCGG GCTGGGCGGC
GTATTCGGCT GGTACTCTCG GGAGTCGCTG CTGCTGGCCA ACAACGTGCT GCTGGTGGTC
GCCTGTGCGG CCATCGCCAT CGGCACCCTC TACCCGCTGG CTCTCGACGC CTTCGATCTC
GGCAAGATCT CGGTGGGGCC GCCCTACTTC GACGCGGTCT TCATGCCGCT GATGCTGCCA
CTGCTGTTCC TGATCGGCAT CGGGCCGGTG GTCTCCTGGA AGCAGTCGGA TCCGATGGAG
ACGGTCCGGC AGCTGCGCTG GATCCTGCTG GTCAGCGCGC TGATCGGCGG CGTCTGGCCG
CTGACCATGG GGGCCTGGAA CCCGCTCACC GCCTTCGGCC TGGGCTTGGC GGCGTGGATC
CTACTCACCG CCGGGACGGA CCTGGTCCGC CGGTTCAACC GCCGACGTCA GCAGGGCGTT
GCCACGGCGC TGCAGGCCGC CCTGCGGCCG AGCTTCTTCG GCATGCACCT GGCCCACGCC
GGTCTCGCCC TGGTGGTCAT GGCCATCGCC ATGGTCAACA CCTACGAGGT CGAGCGGGAC
GTCCGGCTGG AACCGGGCGA TACGGCCACG GCCGGCGCCT ACCAGTTCCG CATGCTCGAC
AGCGAGGTGG TCCGCGGCCC GAACTTCGAC GCCCAACAGG CTACCGTCGA GGTCCTCAAC
CAGGACGGCG AGGTCATCGA CGTGCTCTTC CCACAGCTGC GCTTCTACGA CTCACAGCCG
CAGATGCCCA TGCACCAGGC CTCGCTGAAC CGCGGCATGA CCCGCGATGT CTACGTCTCA
TTGGGAGACG ACCTGGGTGG AGGGGCCTGG ACCATGCGGC TCTACTACAA GCCGTACATG
TTCTGGCTGT GGACCGGCTG TCTGCTGATG GCCTTCGGCG GGTTCCTGGC GGCCGCGGAC
CGGCGCTACC GCATGGCCGG CGACCGGCGC ACGGTCTCCG AGGCCAACAT CGACAGCAGC
GATAATCGCG TGGTGCGGCC AGCCTCGGCG GAGGCGCAGT CATGA
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| Protein sequence | MLGELGNFAL ILAFCLAVIQ SILPLVGTAT GDARLMNSGR SLAVGQFVFL LAAYLILTAA
FVTNDFSIRY VAENSATAPP LVYKITGVWG GHEGSMLFWV LTLSAWTVAV AVFSRALPRE
MLARVLAVLG MVAVAFIAFT ALTSNPFERI FPAPTEGTDL NPLLQDPGMI IHPPLLFIGY
TGLAVAFAFA VAALIGGRLD AAWARWSRPW TTAAWGFLTL GIGLGSWWAY YELGWGGWWF
WDPVENASLL PWLTATALIH SLAVTEKRGG FKVWTVMLAI VSFALTILGG FIVRSGVITS
VHAFATDPDR GVFLLAILAV TLLGSLALYA WRAPKVGLGG VFGWYSRESL LLANNVLLVV
ACAAIAIGTL YPLALDAFDL GKISVGPPYF DAVFMPLMLP LLFLIGIGPV VSWKQSDPME
TVRQLRWILL VSALIGGVWP LTMGAWNPLT AFGLGLAAWI LLTAGTDLVR RFNRRRQQGV
ATALQAALRP SFFGMHLAHA GLALVVMAIA MVNTYEVERD VRLEPGDTAT AGAYQFRMLD
SEVVRGPNFD AQQATVEVLN QDGEVIDVLF PQLRFYDSQP QMPMHQASLN RGMTRDVYVS
LGDDLGGGAW TMRLYYKPYM FWLWTGCLLM AFGGFLAAAD RRYRMAGDRR TVSEANIDSS
DNRVVRPASA EAQS
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