| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1338 |
|---|
| Symbol | |
|---|
| ID | 4710894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1445413 |
|---|
| End bp | 1446294 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855805 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001002907 |
|---|
| Protein GI | 121998120 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGGG CGCGCTCACC GGTGCTGCAG CGGGGCCTGC GCCTCAACTG GCAGCTGGAT
GAACGCCTGC CCGAGCATGT GTACGCCGAC CCCACCCGTC TCGGACAGAT CCTCGCCAAT
CTCGTCGGCA ACGCCATCAA GTTCACAGAG CACGGATCCG TCGACGTTCA CATCACGCCC
CAGCACGATC AGCGCATCTC CTTCCGGGTG GCCGACACCG GCCCGGGGAT CCCTGAATCC
ATCCGCGCCA CCATCTTCGA ACCGTTCGCC CGCGGCGATC AGGGGGTGCC GCAAACCCCG
GGGACCGGGC TTGGCCTGGC GATCTGCCGG GAACTCGTCG GACTCATGGG GGGTCGGATC
GACGTAGAGA GCGCCGAAGG CCGCGGGACG ACCTTCAGCT TCACGGTCGA ACTGCCCGCA
TGTGACGCCA TCGTGCCAGC GGCGGTCGAC ACGGATCGCC CCCGGACACC GAGCCGCCCG
GGAGCGCACC ACGATACGCC GCAGGCCATC CTCGCTGAGG ACGAGCCAAC CAACGCCCTG
CTGCTCAGCA CGTTGCTTGA GCGCGCGGGG TGGGCCGTAA CCACCGTGAC CGACGGCGCC
GAGGCCGTCG AGGCCTGGCA AGAGGCGCAA CCGGAGCTGA TGATCCTGGA CATGCAGATG
CCTCACACCA ACGGCGATCA GGCGGCAGCA CGAATCCGCA GCCTGGAGCA GCAGCACCGG
GTACCGCGCA CGCCCATCGT CATGCTCACC GCCCACGCCC TGGACGATGT CCGCGAGCGC
GCGCGGCAGG CCGGCTGTGA CCACTACCTG ACCAAGCCGG TGGCACCGGA GGATCTGTAT
TCGGTACTGG ACTGGGCCCA GGGCGGCGAC GGGTCGCCAT GA
|
|---|
| Protein sequence | MTRARSPVLQ RGLRLNWQLD ERLPEHVYAD PTRLGQILAN LVGNAIKFTE HGSVDVHITP
QHDQRISFRV ADTGPGIPES IRATIFEPFA RGDQGVPQTP GTGLGLAICR ELVGLMGGRI
DVESAEGRGT TFSFTVELPA CDAIVPAAVD TDRPRTPSRP GAHHDTPQAI LAEDEPTNAL
LLSTLLERAG WAVTTVTDGA EAVEAWQEAQ PELMILDMQM PHTNGDQAAA RIRSLEQQHR
VPRTPIVMLT AHALDDVRER ARQAGCDHYL TKPVAPEDLY SVLDWAQGGD GSP
|
|---|
| |