| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1304 |
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| Symbol | |
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| ID | 4710796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1415124 |
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| End bp | 1416803 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855773 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001002875 |
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| Protein GI | 121998088 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTGT TCCCCGCACG ATACCGCCCA CGCATCGGCG TCGGCGCACT ACTCCTGATC
GGCATTGGCT TCCTGCTCGC CGCCCTCGTC GCCATCCTCA CCATCGGCGG CGCGATCCTG
CTGGACAGGC AGCAAGCCCA CGATCAGCGC GTCAACGCTG TGCTGGCCGA AGGGGTACGC
GCCGAACTGC GAGCCGGCTA CGCGGAACTC GAGCGGTTTC TGGAGGCCCG GGAACCCCGC
TATCGGCGGG CCCATGAAAA GGCCCGACAG ACCATCGAGG AGCGCGGGAT CGAGGAGACC
GACCTCGAGG CCCTGGCGAA GCGGCTCAGC GAGGAACTCG GCGACCCGGT CCACGTCTAC
ATCGTCACCC CGGAGCTGCG CATCAGCCGA ACCACCTTCG AGCCCGACGA AGGATTGGAT
TTCACTATGG AGGGCATGGA AGATGCGCAC GGTATGCTCA AGACTGCGCT CGCCGAGGAC
CAAGTCCTGA TCGGGCCACC CACCCTTGAG CTGGTAAGCC GGGAGTTCCG CTTCTATACC
TATGGCCCGC TCGGCGATGA CGGCTACGCC CTGGAACTGG GTCTCAGCCC GGCGTTCATC
GATGAAGTGT TCCGAGGCAT GGAAGAGCGC TTGGACCAGC GGGCGCTTTA CGAGGGCGAG
CTCTTCTTCC TGGTCAATGG CCAATGGCTG ATCTCTCTAG GCCTGGACCC GGCTCTGCAA
GAGTTGAACA AGGCCAAGGC CTTCGCCGAG GTCCCGACGC AGCAGGACCA AAAGCTGGAG
CGTTTCCAGC GCGCCGTCGG GCAACGGGGC CTCTACCGGC CAGAAACAAC GGACCAACCC
CGATCGTATT ACGCCTGGCT CAACCGCATT GAACTCGACG ACGATGGCCA CCACTTGGAC
ATCCTCGCCC GGCTGGAAAT GCAACACCCC GGTTCTGAGG ATGTGCGTAA GATCTGGATT
GCGGTGCTAG TCGGCACGGG CGGACTCGTC GTCCTGGCCA CTGCGCTCTT CCACCAGATG
GCACGCCGGC TATTGGTCAC CCCACTGCGA CAGACAGCCC AAGCGGCGGC TGCGAGACAG
ACGGTACCCA TCCACGGCCC CGTCCGCTGG ATCCACGAAC TGCGCCTGCT CGCCTGGCAG
ATCAACCGCG GACTGGCGCG CAGTCGGCGA GAAATCCATG CGCTGGACCA ACAGGCGCAA
CACGACCGCC TGACCGGCCT GCTCAATCGC AGCGGCCTCG ACCAACAGAT CGCCACCCAG
GTGGCCCAAC ACCAAGAGAC CGGCAAACCC CTGGCGATGC TGCTGATCGA TCTGGACCAC
TTCAAACGGG TCAACGACGA GCACGGCCAT GCCGTCGGCG ATAAGATCCT CCGCCATCTC
GCCGACCAGC TGCGTGCCGG GGTCCGCGAG GCCGACATCG TCGGCCGCTG GGGCGGCGAG
GAGTTCGTGA TCCTGCTACC CGCCACCGGC CTGGACGGAG CACAGCAGTC AGCCGATAAG
CTGCGCAGGG CTCTCGCCGA CCATCCGGTG CTCAGGCAAC ACGGGCTGAC GGCAAGCTTT
GGGGTCAGCG TCCTGGCTAG CGAAGACAGC GACCGCGACC TCTTCGAGCG CGCCGATTGC
GCGCTTTACG CCGCCAAGCA CCAGGGCCGC AATCGCGTCT CCATCGTGTC GCCGAGCTGA
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| Protein sequence | MALFPARYRP RIGVGALLLI GIGFLLAALV AILTIGGAIL LDRQQAHDQR VNAVLAEGVR
AELRAGYAEL ERFLEAREPR YRRAHEKARQ TIEERGIEET DLEALAKRLS EELGDPVHVY
IVTPELRISR TTFEPDEGLD FTMEGMEDAH GMLKTALAED QVLIGPPTLE LVSREFRFYT
YGPLGDDGYA LELGLSPAFI DEVFRGMEER LDQRALYEGE LFFLVNGQWL ISLGLDPALQ
ELNKAKAFAE VPTQQDQKLE RFQRAVGQRG LYRPETTDQP RSYYAWLNRI ELDDDGHHLD
ILARLEMQHP GSEDVRKIWI AVLVGTGGLV VLATALFHQM ARRLLVTPLR QTAQAAAARQ
TVPIHGPVRW IHELRLLAWQ INRGLARSRR EIHALDQQAQ HDRLTGLLNR SGLDQQIATQ
VAQHQETGKP LAMLLIDLDH FKRVNDEHGH AVGDKILRHL ADQLRAGVRE ADIVGRWGGE
EFVILLPATG LDGAQQSADK LRRALADHPV LRQHGLTASF GVSVLASEDS DRDLFERADC
ALYAAKHQGR NRVSIVSPS
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