| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1288 |
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| Symbol | |
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| ID | 4710546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1399733 |
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| End bp | 1400548 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639855760 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001002862 |
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| Protein GI | 121998075 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.381698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCCGCG TCCTTGGCGT TGCTCGCAGC GGCTTCTACG CATGGTGTCG GAACAAAGCT
GTCCGCGCCG CACGGGAAGA GCGCCAGCAG GCCTTTGATG GGCAGGTGCA AGAGGCCTTC
GAAGACTCCA GGCAACGCTC TGGAGCGCCT CGACTGACGC GAGAGCTGGA CGGGCAAGGC
GTGTCGGCCA ATCGCAAGAC CGTGGCCCGG AGCATGCGCC GTCAGGGCCT CCGGGCACGC
ACGTCACGCC GGTTTAAGGT GACGACGAAC TCGGCTCACA GCCTGCCGGT CGCGCCAAAC
CACTTGGCCC AGCACTTTGA AGCGGAGCAG CGGAACCAGA AATGGACTGG CGACATCACG
TATTTGGCGA CCGGCGAAAG ATGGCTCTAT CTCGCGGTCG TCCTGGATCT TTGTGGCCGC
AAAGTGATCG GTTGGGCCAT GCGCGAGCAG ATGAGCGCTG AACTGGCCTG TGAGGCGCTT
CAGATGGCCC TGGAACGGCG AGGCTACCCC ACGGGGGTCA TCGTCCATAC GGATCGAGGC
AGCCAGTACT GCTCCCGTGC GTACCGCAGG CTCATCAGCG ACTACGGGCT GATCAGCAGC
ATGAGCGCGA AGGGCAGCTG CTACGACAAT GCCTGCAACG AGAGCTTTTT CCGTTCCCTG
AAGGTCGAGG CCCTGCATGG CGAGAAATTC CCCACGCGGG CCTCGATGCG TGAGGCCGTC
TTCGAATACA TTGAGGGCTA CTACAATCGC CGGCGTCTTC ATAGCACGCT CGGGTACCTA
TCCCCGGACG ACTACGAGGC CCGGCTTAAT AGCTAA
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| Protein sequence | MCRVLGVARS GFYAWCRNKA VRAAREERQQ AFDGQVQEAF EDSRQRSGAP RLTRELDGQG
VSANRKTVAR SMRRQGLRAR TSRRFKVTTN SAHSLPVAPN HLAQHFEAEQ RNQKWTGDIT
YLATGERWLY LAVVLDLCGR KVIGWAMREQ MSAELACEAL QMALERRGYP TGVIVHTDRG
SQYCSRAYRR LISDYGLISS MSAKGSCYDN ACNESFFRSL KVEALHGEKF PTRASMREAV
FEYIEGYYNR RRLHSTLGYL SPDDYEARLN S
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