Gene Hhal_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1278 
Symbol 
ID4710531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1391732 
End bp1392160 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content69% 
IMG OID639855752 
Productputative prophage repressor 
Protein accessionYP_001002854 
Protein GI121998067 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.824294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGA CCCACCTGCA GACCTGCGCC AGGGAGCCTG CCGCGCTGCG CCGCCCGCTC 
TTTCTGGAGC GCGTTGCCGC CGGCTTCCCC TCCCCGGCTC AGGACTACGT CGACCGGGCC
CTCGATCTCA ACGAGCTCTG CATCGAGCAC CCGGCCGCGA CCTACTTCGT CCGCGCCGCC
GGCGAGTCGA TGCTTGGCGT CGGCATCCAC CCCGGCGACG TCCTGGTGGT GGATCGCGCC
CTCGAGGCTC GGCACCGGGA CATCGTCATC GCCGCCTGGC AGGGCGAGCT TACGGTCAAA
CGGCTGGAGC TCCGGCCGAC GCTGCGCCTG GTCGCCGAGA ACGACGCCTT CCCGCCGATC
GATATTGCCG AGCCGGAGAT GCTTGAGATC TTCGGGGTGG TTACGTTCGT CATCCACGCC
CTGCGCTGA
 
Protein sequence
MTVTHLQTCA REPAALRRPL FLERVAAGFP SPAQDYVDRA LDLNELCIEH PAATYFVRAA 
GESMLGVGIH PGDVLVVDRA LEARHRDIVI AAWQGELTVK RLELRPTLRL VAENDAFPPI
DIAEPEMLEI FGVVTFVIHA LR