Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1271 |
Symbol | |
ID | 4710740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1381997 |
End bp | 1385491 |
Gene Length | 3495 bp |
Protein Length | 1164 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855744 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001002848 |
Protein GI | 121998061 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGGCCG AGCCATCCAT CGAACCTGGT TTCCTGACCA TCCACGGCAA TCGGCTGGAA GACCTTCGGC AGGTGGCCGT GGAGTGGGTG CAGCGGCACC CACTCGCACC CCTTGAGGAC GAGGTGTTCC TGGTCCAGAG CAATGGTATG GCGCAGTGGC TGCGCCTGGC CTTGGCTCGC CACCCGGATT CGGAGCAGGG CGGTTGCGGG ATCGCTGCGG CGGTCTCGAT GCAGTTGCCG GCGCGCTTTC TCTGGTCGGT CTACCGTGCG GTCCTAGGCC CGGAGGGCGC CCCGCGGGAA TCCCCCTTCG GCAAGGACCC GCTGCTCTGG CGGCTCGCGC GCCTGCTTCC CGCACTCCGC GATCACCCTG GGTTTGAGCC GCTGCGCGGC TTCCTGGCCG ATGATCCCGA TGGGCGCAAG CGTTATCAGC TCGCTGCACG GATTGCGGAT CTCTTTGATC AGTACCAGGT CTACCGTGCG GACTGGTTGG CGGACTGGTC GCGGGGCGAG GACGTCTGCC GCGATGCACG TGGACAGGCG CGCGATCTGG ACGATACGCA GCGCTGGCAG GCTTCGCTCT GGCGTGCGGT GTGCGCGGAA CTTGCCGAGG TGGCGGACGA GGCGGGCCAG GCCACGGTCC ATCAACTCTA CCGGGAGCGC ATCGCGAGCC TGGACACCGC GCCGGCAGAC TTGCCGCGTC GGGTGATCGT CTTCGGCATC TCGTCGCTTC CGCGCCAGAC ACTGGAGGCG CTGCAGGAGC TGTCGCGTTT CGCCCAGGTG CTCGTCTTTG TTCACAATCC CTGCGCCTTC TACTGGGCGG ATATCATCGC GGATAAGGAT CTGCTGCGTG CCGACCCCGG GCGGCGGCCA CGCAAGGCCG GCATGCCCGA GGTCCTGCAT CCGGAAGAGC TGCACAATCA CGCCCACCCC CTGCTCGCCG CCTGGGGCAA GCAAGGGCGC GACTATATCG GACTGCTGGA TGCCCACGAG GATCCCCAGG CCCATCCGCA CCAGGCCCTG GCCCAGGCGG GCGAGCGCAT CGATCTCTTC CGTGGCCCGG CGACCGGATC TCTGCTCGGC CAGCTCCAGG ACGATATCCT CCACCTGCGT CCGTTGGCCG AGACCCGGGA GGCCTGGCCG GCGGTCGGCC GCGAAGATGC GTCGCTGCAA TTCCATCTGG CCCACAGCGC CCAGCGCGAG GTCGAGGTTC TCCATGACCG GCTGCTCGCC GCTTTCTCGG AGGACAGCTC GCTGCGCCCG CGCGATGTCA TCGTGATGGT GCCGGATATC GACGCTTACG CACCGCACAT CGAGGCCGTG TTTGGTCGCT TCGATGCCGG CGATGCGCGC CACATTCCCT ATACGGTGGC CGACCAGGGC GAGCGCGGGC TGGATCCGCT GCTCATCGCC CTGGAGCAGC TTTTGAGCCT GCCCGAGTCG CGTTGCGGGC TGAGTGACCT GCTCGATCTG CTCGAGGCGC CGGCGTTGCG GCGGCGTTTC GGGATCACCG AGGCGGACCT GGCCACCCTG CACGGCTGGG CAGAGGAGGC CGGGGTCCGC TGGGGACTCA ATCGCGAGCA GCGCGCCGGG CTGCAGTTGC CCGAGGGACT GGAGCAGAAT ACCTGGCGCT TCGGTCTGCG GCGTATGCTG CTCGGCTACG CCGTCGGCGC CGGGGAGGCC TGGTCCGGGG TCGAACCGTA TCCGCAGGTG GGCGGGCTCG ACGCCGCCCT CGTCGGGCGC CTGGAGCGGC TGGTCGGCGC CCTGGAAGGC ACCTGGGGCG AACTGCGCGA GGAGGCCACC CCGGAGCGGT GGGGCGAGCG GCTGCAGCGG CTGCTGGGGA CCTACTTCGA CCCCTCCGGC GAGGTGGAGT CGTTGACCCT GGAGCGGCTG CGCGATGCCC TGGAGAAGTG GCAGCGTGAC TGCGAGACCG GGGCGTTCGC CGAGCCGCTG CCTCTGAACG TGGTGCGCGA GCACTGGCTG CAGGCGCTGG AGGATACGCG ACTGAGCCAG CGTTTCCTGG TCGGGGCGGT GAACTTCTGC ACCCTGATGC CCATGCGCGC GATCCCCTTC CGCCACGTCT GCCTGCTCGG GATGAACGAT GGCGACTACC CGCGCAGCCC CACCCCCCTG GATTTCGATC TGATGGCTGA CGATTACCGG CCCGGCGACC GCTCGCGCCG CGAGGACGAT CGCTACCTCT TCCTGGAGGC GCTCCTCTCG GCCCGGGATC GGCTCTACAT CAGCTGGATC GGCCGCAGCG TGCGTGATAA CGAGCCACGT CCGCCTTCGG TGCTGGTCGG TCAGCTGCGC GATCACCTGG CCGCCGGCTG GCGCCTGGCC GACGAGGAGG AGGCCGGCGG TCTGCTCGAG GCGTTGACCG TGGAGCACCC GCTGCAGCCG TTCAGCCGCC AGAATTTCCG CACGGAGCCC TCGGCGCGCC ACTACACCTA CGCCCGCGAG TGGTGGGCGG CCCATCAGGG CGATGAAGCC GGGTCCGGGC CGCGGGTCAC GACGCTGCCC GAGCGGCCGG TGGAGGATCC GCCGGCGCCG ATCACACCCG AAACCCTGGG GGCGTTGCTC AAGCAGCCCG TACAGACCTT CTTCAACCGT CGCCTGGGGG TCCGGTTCGA GGATGATCCA CTGGCCAGCG AGGATCAGGA GCCCTTCGGG CTCGACGGGC TGACACGCTG GCAGATGCGC GAGGTGCTCT TCCTGGCCGG GCAGGAGGCG GCCGGGGATC CCGAGATGCG CCGCGAACGG CTGGCCGCCG AGGCGCAGCG GTTGCAGCGC ACCGGCGCGC TGCCGCTGGG CCCGGCCGGT ACCGTCTGGG CCGAGACGCT TCAGATCGAA GCCGATGAGC AGCTGGAGCG CTACCACCGG CATCTGGCTA CCTATCCCCA TGAGCTGGAG CCGCTGCAGC GGCTGATGCA CCGCCATGGG GATTGGCAGC TGGAGGGCGG GGTGGATGGG ATCCGCAGTG ACGGGCAGCG GCGCGTGCGC CTGACGCACC ACCTCAGCCG CCTGGGGGTC AAGCGCCGGG AGGTACGCTG GCGCTTTGAC CTGCTTGCCA CGCCGTGGGT CACCCACCTG ATGGCCAACG CGGCCGCGGA GCCGCTGACG ACCGTGGTCG TCGGACACGA CATCGACGTG GCCCTGGCGC CGCTGGAGGC GGGGCAGGCC CACGAGCACC TGAGCCAGCT GCTCGCCGGC TGGGCCGAGG CGCAGCGCCG GCCGCTGCCG GTGCCCTGCC AGCCGACCTG CGCCTGGCTG ACCGCGCAGG ACGAGGAGCG CGGTGATCCG GCGGCCGCGG CCGAACGGGT CTATGCCGGG GATGACTACA CGTGGGCGGC CGCCGACGCC CACGATCTGC GCGCCTTCCC GCGGGCGGCG GACTGGCTGG AGGATGCGGC CTTCCCGAGC TGGCGCGACG CGCTCTACGC GCCCCTGTGG CGGGCGGTCA AGGAGTACGC GGAGGACGGC GATGGGCACG GCTGA
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Protein sequence | MAAEPSIEPG FLTIHGNRLE DLRQVAVEWV QRHPLAPLED EVFLVQSNGM AQWLRLALAR HPDSEQGGCG IAAAVSMQLP ARFLWSVYRA VLGPEGAPRE SPFGKDPLLW RLARLLPALR DHPGFEPLRG FLADDPDGRK RYQLAARIAD LFDQYQVYRA DWLADWSRGE DVCRDARGQA RDLDDTQRWQ ASLWRAVCAE LAEVADEAGQ ATVHQLYRER IASLDTAPAD LPRRVIVFGI SSLPRQTLEA LQELSRFAQV LVFVHNPCAF YWADIIADKD LLRADPGRRP RKAGMPEVLH PEELHNHAHP LLAAWGKQGR DYIGLLDAHE DPQAHPHQAL AQAGERIDLF RGPATGSLLG QLQDDILHLR PLAETREAWP AVGREDASLQ FHLAHSAQRE VEVLHDRLLA AFSEDSSLRP RDVIVMVPDI DAYAPHIEAV FGRFDAGDAR HIPYTVADQG ERGLDPLLIA LEQLLSLPES RCGLSDLLDL LEAPALRRRF GITEADLATL HGWAEEAGVR WGLNREQRAG LQLPEGLEQN TWRFGLRRML LGYAVGAGEA WSGVEPYPQV GGLDAALVGR LERLVGALEG TWGELREEAT PERWGERLQR LLGTYFDPSG EVESLTLERL RDALEKWQRD CETGAFAEPL PLNVVREHWL QALEDTRLSQ RFLVGAVNFC TLMPMRAIPF RHVCLLGMND GDYPRSPTPL DFDLMADDYR PGDRSRREDD RYLFLEALLS ARDRLYISWI GRSVRDNEPR PPSVLVGQLR DHLAAGWRLA DEEEAGGLLE ALTVEHPLQP FSRQNFRTEP SARHYTYARE WWAAHQGDEA GSGPRVTTLP ERPVEDPPAP ITPETLGALL KQPVQTFFNR RLGVRFEDDP LASEDQEPFG LDGLTRWQMR EVLFLAGQEA AGDPEMRRER LAAEAQRLQR TGALPLGPAG TVWAETLQIE ADEQLERYHR HLATYPHELE PLQRLMHRHG DWQLEGGVDG IRSDGQRRVR LTHHLSRLGV KRREVRWRFD LLATPWVTHL MANAAAEPLT TVVVGHDIDV ALAPLEAGQA HEHLSQLLAG WAEAQRRPLP VPCQPTCAWL TAQDEERGDP AAAAERVYAG DDYTWAAADA HDLRAFPRAA DWLEDAAFPS WRDALYAPLW RAVKEYAEDG DGHG
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