Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1269 |
Symbol | |
ID | 4710602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1376249 |
End bp | 1378291 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855742 |
Product | exodeoxyribonuclease V, alpha subunit |
Protein accession | YP_001002846 |
Protein GI | 121998059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGTGC GGGTCGATCA GGAGGCGATC CTCAGGTGGC TGCGTGAGGC CGAGGCGCTG GGCTGGCTGC GCCCGTTGGA TGGGGCCCTG GCGGAGTTCC TGCGTGAGCA GGTGCCCGAT GCGCCGCCGC TGCTGTTGCT GGCCGCAGCG CTGACCAGTC ATCAGGCGGG CCGTGGGCAT GTCTGCCTGG ATCTCGATCA GCTCTGGGAA CGGGCCGAGC CGGTCCTGAG CCTTCCGCCG GAGACCGTTG ACGCGCCCGA GCCGGTGAAA TCGCCCGCGG CACTCCTGGA CGCCGCCGGC GGTCGCGATG CGTTCGAGCG GCAATTGGAG TGCCCGGAAC TGGTGGGCAG AGGCCCCGGT TCCACACCGC TGGTCCGCGA CGGACCGAGG CTCTATCTGC GCCGCTACTG GGCCTGCGAG CGCACCATCG CACGGGTGGT GCAGCAGCGC GTGGATGCAG CGGCGCAGTG GCGCGCGCAG CTCGACCCGG CCACGGTCCG GCGCTGGCTG GATGGGTTGT TCGGCGCGCC TGGGGGCGAT GGCCCGGATT GGCAGCGGGT CGCCTGTGCC GTGGCCGCCG GCAGTGGTTT CAGTGTTATC ACCGGCGGAC CGGGTACCGG CAAGACTACG ACGGTGTTGC GTCTGCTGGC GTTGCTGCAG GGGCTCCACG GCGGGGCCCT GCGCATCCGC CTGACGGCCC CCACCGGCAA GGCGGCGGCA CGGCTGAACG CGAGCATCGC CGGGGCGGTG GATCGGCTGG GGCTGGAGGA GCTGGACGGC GGCGCCGAGC TGCGCGCGCG GATACCCACC GAGGTGGTGA CAGTGCACCG GCTGCTGGGC GCAGGCGGTG GACGGCGCTT TCGCCACCAC GCCGGGGAAC CCCTGGCCGC GGATGTGGTG GTCGTGGATG AAGCGTCGAT GATCGACGTG GAGTTGATGG CGGCGTTGCT GGAGGCCCTG CCGGATGGGG GCCGTCTGGT GCTGCTTGGT GACAAGGACC AGTTGGCCTC GGTGGAGGCC GGGGCCATCC TTGGCGAGCT CTGCGCCCGG GCAGATCAGG GCGGTTATTG GCCCGATACC GCCGAGTGGC TAGAGGCGGT CAGCGGCCAG TGCATCCCGT CGGCGCTGAT CGATCCCACC GGCGGTGGTC TCGACCAGCA TGTCGTCATG CTTCGGCACA GCCACCGGTT CGGTGCCGAC AGCGGGATCG GGCGCTTGGC TCGGGCGGTG AATGCCGGTG ATCAGGCGGC GGTCGAGGCT TGGGGGTATG GGCACGAGGG CGATCTGGCG CGGGTGCAGC TTGCCGACGG AGAGCAAGAC CCGACGCTGA TCCACTGGGC GGTGGACGGC GGGCAGACCG GCCTGGGCTA CGCCGCTTAT CTGAGCGACA TCCAGGAACT GCGACCGGGC CCGGATGCCT CCGCTGGGGA GTACGCCGGC TGGGCCTCGC AGGTGCTGGA GACGCACGGG GCGTTCCAAT TGCTGGCGGC GCTGCGGCGC GGACCGTACG GGGTCGAGGC CCTCAATGAG CGCCTTGCCG CGGCGCTGCG CCAGCGGGGG CTGATCCGAG GTGAGGGGGC CTGGTACGAG GGCCGACCGG TGATCGTCAC GCGCAACGAT TACGGCCTGG GGCTGATCAA CGGGGATATC GGCATCGCCC TGCGCGTCCC GCGCTTCCTG GTGCAGAGCC CGGAGGCGGG GGGTGCCGGG GAGGAGCGAC AGAAGGTGCT GCGTGTCGCC TTCCGCGCCG CCGATGGCAG CGGACGCATC CGCTGGGTCC CGCCCCATCG GCTGGAGTCC GTGGAGACGG CATTCGCCTT GACGGTGCAC AAGGCCCAGG GTTCGGAGTT TCGCCACGCA GCCTTATTGC TGCCGGATCG GCCCAGTCCG GTGCTCACCC GTGAGCTCCT CTACACCGGC ATCACCCGGG CCAGTCAGTG GTTCACCCTG CTGGAGCCGC AACCGGCCGT GCTGAAGGCG GCGGTGCGCC AGCGAACCGT TCGTGGTGGC GGCCTGCGGG CCATGCTCGA GGCTGCTGGC TAG
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Protein sequence | MSVRVDQEAI LRWLREAEAL GWLRPLDGAL AEFLREQVPD APPLLLLAAA LTSHQAGRGH VCLDLDQLWE RAEPVLSLPP ETVDAPEPVK SPAALLDAAG GRDAFERQLE CPELVGRGPG STPLVRDGPR LYLRRYWACE RTIARVVQQR VDAAAQWRAQ LDPATVRRWL DGLFGAPGGD GPDWQRVACA VAAGSGFSVI TGGPGTGKTT TVLRLLALLQ GLHGGALRIR LTAPTGKAAA RLNASIAGAV DRLGLEELDG GAELRARIPT EVVTVHRLLG AGGGRRFRHH AGEPLAADVV VVDEASMIDV ELMAALLEAL PDGGRLVLLG DKDQLASVEA GAILGELCAR ADQGGYWPDT AEWLEAVSGQ CIPSALIDPT GGGLDQHVVM LRHSHRFGAD SGIGRLARAV NAGDQAAVEA WGYGHEGDLA RVQLADGEQD PTLIHWAVDG GQTGLGYAAY LSDIQELRPG PDASAGEYAG WASQVLETHG AFQLLAALRR GPYGVEALNE RLAAALRQRG LIRGEGAWYE GRPVIVTRND YGLGLINGDI GIALRVPRFL VQSPEAGGAG EERQKVLRVA FRAADGSGRI RWVPPHRLES VETAFALTVH KAQGSEFRHA ALLLPDRPSP VLTRELLYTG ITRASQWFTL LEPQPAVLKA AVRQRTVRGG GLRAMLEAAG
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