Gene Hhal_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1248 
Symbol 
ID4710484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1354511 
End bp1355143 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID639855721 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001002825 
Protein GI121998038 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGC TCATCCAGGC CGGTGGCTGG CTGATGATAC CGATCCTCAT CGGTTCCGTC 
CTGGCCCTGG CCATCATCAT CGAGCGATTC TGGACCCTGC AGCAGAGACG CATCCTCCCG 
GAGCCGCTGC GCGGGCGGGC CTGGCGCCTG GCGCAGGAGC ACGAGTTAGA GGCCCACCAT 
CTCGAGACCC TCAAGGAGAG CTCGCCCCTC GGTCGGATCC TGGCGGCCGG CCTGGCCAAT 
CGGCACCACG GCCGCAGTGT CATGGCCGAG GCGATCGAGG ATGCCGGCCG CCATGAAGCC 
CACCGCCTCG AGCGCTACCT GAACACGCTG GGCACCATCG CGGCGATCAG CCCGCTGCTC 
GGGCTCCTGG GCACCGTGAT CGGCATGATC AAGGTCTTCG GGGCGATCAG TGCCGAGGGT 
CTGGGTGATA TGGCCGCCCT CTCGGGGGGG ATCGCCGAGG CCCTGATCAC CACCGCATCG 
GGGTTGACCA TCGCCATCCC GGCGCTGATG GCGTATCGCT ACCTGCGCGG CCTGGTCGAC 
GAACGGGTAG TCGAAATGGA GCAGGAGGCG ATGCTTCTGC TCGAGGCCAG CGATCCTGAG 
CGTCCGGTAC AGCGAGCCCG GGGGGCCGCT TGA
 
Protein sequence
MLELIQAGGW LMIPILIGSV LALAIIIERF WTLQQRRILP EPLRGRAWRL AQEHELEAHH 
LETLKESSPL GRILAAGLAN RHHGRSVMAE AIEDAGRHEA HRLERYLNTL GTIAAISPLL 
GLLGTVIGMI KVFGAISAEG LGDMAALSGG IAEALITTAS GLTIAIPALM AYRYLRGLVD 
ERVVEMEQEA MLLLEASDPE RPVQRARGAA