Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1243 |
Symbol | |
ID | 4710475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1350003 |
End bp | 1350491 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639855716 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001002820 |
Protein GI | 121998033 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGAGG ACAAACTGCG TGTGCTGCTC GTCTGCATGG GCAATATCTG TCGATCGCCA ACGGCGGAGG GTGTGCTGCG CCAACGCCTG CGCGAGGAGG GGATCGAGCA GCTGGTAGAG CTCGATTCAG CGGGTACCCA CGACTTCCAC ACCGGCAAGA GTCCAGACCA GCGCGCCCAG ATGGCAGCGC AGCGGCGGGG GATCGATATC AGCGATCTGC GCGCCCGGCA GGTGGAGCGT CACGATTTCG AGGCCTACGA TCTGATCCTG GCGATGGATG AGGCCAATCT GGGCATCCTG CAGGCCGACT GCCCGCCGAA GCATGCCCAC AAGATCGGGC TATTCCTCGA TTACGCGCGC GACCGCAGTG AACGGGAGGT GCCGGATCCT TACTACGGTG GCGAGCGGGG TTTTGAGCAC GTCCTCGACC TGATCCAGGA AGCTGCCGAT GGACTGATCG CCGAGGTCCG TCAGCGCCAG CAGCGCTGA
|
Protein sequence | MSEDKLRVLL VCMGNICRSP TAEGVLRQRL REEGIEQLVE LDSAGTHDFH TGKSPDQRAQ MAAQRRGIDI SDLRARQVER HDFEAYDLIL AMDEANLGIL QADCPPKHAH KIGLFLDYAR DRSEREVPDP YYGGERGFEH VLDLIQEAAD GLIAEVRQRQ QR
|
| |