Gene Hhal_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1243 
Symbol 
ID4710475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1350003 
End bp1350491 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID639855716 
Productprotein tyrosine phosphatase 
Protein accessionYP_001002820 
Protein GI121998033 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGG ACAAACTGCG TGTGCTGCTC GTCTGCATGG GCAATATCTG TCGATCGCCA 
ACGGCGGAGG GTGTGCTGCG CCAACGCCTG CGCGAGGAGG GGATCGAGCA GCTGGTAGAG
CTCGATTCAG CGGGTACCCA CGACTTCCAC ACCGGCAAGA GTCCAGACCA GCGCGCCCAG
ATGGCAGCGC AGCGGCGGGG GATCGATATC AGCGATCTGC GCGCCCGGCA GGTGGAGCGT
CACGATTTCG AGGCCTACGA TCTGATCCTG GCGATGGATG AGGCCAATCT GGGCATCCTG
CAGGCCGACT GCCCGCCGAA GCATGCCCAC AAGATCGGGC TATTCCTCGA TTACGCGCGC
GACCGCAGTG AACGGGAGGT GCCGGATCCT TACTACGGTG GCGAGCGGGG TTTTGAGCAC
GTCCTCGACC TGATCCAGGA AGCTGCCGAT GGACTGATCG CCGAGGTCCG TCAGCGCCAG
CAGCGCTGA
 
Protein sequence
MSEDKLRVLL VCMGNICRSP TAEGVLRQRL REEGIEQLVE LDSAGTHDFH TGKSPDQRAQ 
MAAQRRGIDI SDLRARQVER HDFEAYDLIL AMDEANLGIL QADCPPKHAH KIGLFLDYAR
DRSEREVPDP YYGGERGFEH VLDLIQEAAD GLIAEVRQRQ QR