Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1235 |
Symbol | |
ID | 4710457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1341301 |
End bp | 1342272 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855708 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001002812 |
Protein GI | 121998025 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.226489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAACG CAAGGATTAT CGGCACGGGG AGCTATCTTC CCGAACGGGT GGTCACCAAT CAAGATCTCG AGCAGCACGT CGAGACCTCC GATCAGTGGA TCCGTGAGCG TACCGGGATC TGTGAGCGGC GGGTGATCGG CGAGGACGAG GTCTGTGGAG ACCTCGGCCG GATTGCCGCA CAACGCGCCC TGGAGGCTGC CGGGGTCAGC GGGGACGAGA TCGATCTGAT CATCGTCGCG ACGTGCACCC CTGACCGCAT CTTCCCCAGT ACGGCCTCGT CGCTCCAGCG CGCCCTGGGG GTTCGTCCGG GGGCGGCGGC GTTTGATATC GCCGCAGCGT GCTCCGGCTT TATCTACGCC CTGGGGATTG CTGAGCGTTT TGTGCGCTTC GGCGACGCCC AGCGTGCCCT GGTCGTCGGT GCGGAGGCGA TGACCCGAAT CCTCAATTGG GACGATCGGG GGACCTGTGT GCTCTTCGGG GACGGCGGCG GCGCCGTGGT CCTGGAGGCT TCTGAGGAGC CCGGGGTGCT CTCCACCCAC CTGCATTGCG ACGGGCGTTA CGAGCCCTTG CTGTACGTGC CATGGGGGCC GGGGCGTGGT TATGCCGCGC TGGGGGCCGA GAGCGGCTAT ATCCACATGC GAGGGAACGA GGTGTTCAAG GTGGCTGTGA ACACCTTGAC GCGGATCGTC GAAGAGACCC TGGATGCCGC CGGTGTCGAT AAAGGGGAGG TCGACTGGCT GGTCCCGCAC CAGGCGAATA TCCGCATCAT CCAGGCCACT GCCAAGAAGC TCGACCTCCC GATGGAGCGC GTCGTCGTGA CGGTGGGTGA GCACGGCAAC ACGTCGGCAG CCTCGATCCC GATTGCCCTC GATACCGCAG TGCGCGACGG TCGCATCCAG CGCGGTGAGA CCCTGCTGCT GGAGGCCTTC GGCGGCGGAT TCACCTGGGG ATCGGCGCTG GTGCGCTATT AA
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Protein sequence | MRNARIIGTG SYLPERVVTN QDLEQHVETS DQWIRERTGI CERRVIGEDE VCGDLGRIAA QRALEAAGVS GDEIDLIIVA TCTPDRIFPS TASSLQRALG VRPGAAAFDI AAACSGFIYA LGIAERFVRF GDAQRALVVG AEAMTRILNW DDRGTCVLFG DGGGAVVLEA SEEPGVLSTH LHCDGRYEPL LYVPWGPGRG YAALGAESGY IHMRGNEVFK VAVNTLTRIV EETLDAAGVD KGEVDWLVPH QANIRIIQAT AKKLDLPMER VVVTVGEHGN TSAASIPIAL DTAVRDGRIQ RGETLLLEAF GGGFTWGSAL VRY
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