| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1231 |
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| Symbol | |
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| ID | 4710439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1337517 |
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| End bp | 1338926 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855704 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001002808 |
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| Protein GI | 121998021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000119996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACATA CTGCGTCAGG TAGAGAAGTC CGACACGGCC TAGAAGACGA CGACGCGGAT
ACGATCTGCG CGATGGCGAC CCCGTCCGGT CAGGGCGGGG TCGCTGTCGT TCGGGTATCC
GGATCGCGGG CCCTGGAGGT CGCCGAAGAG GTGGCGGGAC CGTTGCCGGC GCCCCGAGAG
GCCGGTTTGC GCCGGTTTCG CGACGCACGC GGGGAGACCC TGGATCACGG CTTGGTGCTG
GTGTTTCCGG GGCCGGGGTC TTACACCGGC GAGGACGTGG TTGAGCTGCA GGGGCACGGC
AGCCCGGCGG CGGTGACCGC GGTGCTCGAG GCCTTATGCG CAGCTGGGGC GCGGCCAGCC
GGCCCTGGAG AGTTTTCCGA GCGGGCGTTC CTGAACGGGC GGTTGGATCT CACGCAGGCC
GAGGCGGTGG CCTCGCTGAT CGAAGCGGAG ACCGACGGCG CGCGCCGCGC AGCGCTACGG
GCGCTGTCCG GGGCGTTCGG CCAACGCGTC GATGGGCTGG CGGATCGGAT GATCGATCTT
CGGGCGCTGA TCGAGGCGTT CCTGGATTTT CCTGAGGATG AGGATGTACC GGCGGACCCA
CCGGAGCTCG CGGCCGAGAT CGAGGCGTTG GGCTCGGAGC TGGCGGAGAT CCGGCGACGG
GCGGCGGCCG GGGTGCGTTT CGGGGAGGGG ATCCGGGTGG CGCTCGTCGG CCCGCCGAAC
GCGGGGAAGT CGAGCCTGCT CAACGTGCTC AGCGGCGAGG AGGCGGCGAT CGTTTCGGCA
CAGGCGGGTA CCACGCGGGA CGTGGTCCGG CAGTGGGCGG CGCTGGGATC GCGGCACGCC
GAGCTCTTGG ACACCGCCGG GCTGCGGGAT GCGGAGGCCC AGGATGAGAT TGAGGCCGAG
GGTGCGCGGC GGGCGCGGGC GGCGGCCTCG GAGGCCGATC TGCTGCTCGT GGTCATCGAG
GCAGGGAAGA CACTGGACGA GGAACTGCGG GCGCGGATTG CGGAGCAGGC GCCGCGTCCG
GTGGTGGTGA TTGTGAATAA GATTGATGCC AGCGGGGACG AGGCAGGTTG GGAAGGAGAG
AGTGAGGTGG GTGCCCATGT CCGGAGGGCG CGGGTGAGTG CGCACACCGG GGCGGGTATC
GAGGCGCTTC GGCGCGGGCT GGCGGCGCTG GTGGACCGTG AGGCGGGAGA GGACGCCTGG
GCGGCTCGGC ATCGACACAT CGAGGCGCTG GATCGAGCCG GGGAGGAGCT GGAGGAAGCG
CTGGTGGTCG CCCGGCGGGG CGGGCAGGAG GAGCTGGTCG CCGAGGCGCT GCGTCGGGCG
CAGACGGCGC TCGGCGAGAT CACCGGGCGC GTTAGCCATG AGGCGCTGCT AGGGCGGATC
TTCTCCGGCT TCTGTATCGG AAAAGAATAG
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| Protein sequence | MVHTASGREV RHGLEDDDAD TICAMATPSG QGGVAVVRVS GSRALEVAEE VAGPLPAPRE
AGLRRFRDAR GETLDHGLVL VFPGPGSYTG EDVVELQGHG SPAAVTAVLE ALCAAGARPA
GPGEFSERAF LNGRLDLTQA EAVASLIEAE TDGARRAALR ALSGAFGQRV DGLADRMIDL
RALIEAFLDF PEDEDVPADP PELAAEIEAL GSELAEIRRR AAAGVRFGEG IRVALVGPPN
AGKSSLLNVL SGEEAAIVSA QAGTTRDVVR QWAALGSRHA ELLDTAGLRD AEAQDEIEAE
GARRARAAAS EADLLLVVIE AGKTLDEELR ARIAEQAPRP VVVIVNKIDA SGDEAGWEGE
SEVGAHVRRA RVSAHTGAGI EALRRGLAAL VDREAGEDAW AARHRHIEAL DRAGEELEEA
LVVARRGGQE ELVAEALRRA QTALGEITGR VSHEALLGRI FSGFCIGKE
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