| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1226 |
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| Symbol | |
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| ID | 4710434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1332254 |
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| End bp | 1333354 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855699 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001002803 |
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| Protein GI | 121998016 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.123805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCG AGGTCCAACG CGAACCCCTG CTCGCCGCCC TCCAGTCGAT CGTCGGCGTC
GTGGAACGCC GCCAGACCCT GCCGGTTCTT GGCAACATCC GCGTCGAAGC CCGATCGCAA
CAGCTGCAAC TCACCGCCAC CGACCTCGAG GTGGAACTCG TCGCGTACCT TGAGGCCAAC
ACGAAAGACG AAGGTGTGAT CACGCTTCCA GCACGGAAAT GGCTGGATAT ATGTCGAAAT
CTTCCGGAAG GTGCGTCGAT CAGCATCGAA GCCAATCAGG ATCGGGCGAC CCTGCGCGCC
GCCAGCAGCC GCTTCTCCCT GGCCACCCTG CCCGCCGATG AATTCCCCGA GGTCGAGTCC
ATCGGCGACA CCGAGGCCGT CGAGATCCCG CGCGGCGAAC TCCGCCGACT CATCGAGCGG
ACGCACTTTT CCATGGCGCA GCACGACGTC CGTTACTACC TCAACGGCCT GTTGCTAGAA
CTCACCGGGA GCGGCGCTCG CGCCGTGGCC ACCGATGGCC ACCGCCTCGC CCTCGCCGAG
AGTGACAGCC CGGTCCAAGT GGCCCAACCC CGCCAAGTCA TCGTCCCGCG CAAGGGCGTC
CAGGAGTTGC TTCGCCTGCT CGACGATGCC GATGAGCCTG CCACCCTCGA GTTCGGTACC
AACCACGTCC GGGTCACGCT GCAGTCCGTC CGTCTGACGT CCAAGCTGAT CGACGGCGTA
TTCCCCGATT ACAATCGGGT TATCCCCCAG GATGGCGACA AACACGTCCT GATCGATCGC
CAGTACCTGC GCCAGGCCCT GACCCGGGTG GCCATCCTCT CCAACGAGAA ATATCGGGGC
ATCCGCTTCG CCGTGGAGGG TGACACCCTG CGGATCGGCT CCCACAACCC GGAACAGGAG
GAGGCCGAGG AGGAGCTGGG CATCGAGTAC GGTGGCGAGG CCGTGGAACT CGGCTTCAAC
GCCAACTACC TCCTCGATGC CCTCGGTGCC CTGGATACCG AGCGCGTCCA AGTGACCCTG
ACCGACGCCA GCAGCAGCGG CCTGATCCGT GCCGAGGGGT CCGACAATGC GCGCTACGTC
GTTATGCCGA TGCGCCTCTG A
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| Protein sequence | MRFEVQREPL LAALQSIVGV VERRQTLPVL GNIRVEARSQ QLQLTATDLE VELVAYLEAN
TKDEGVITLP ARKWLDICRN LPEGASISIE ANQDRATLRA ASSRFSLATL PADEFPEVES
IGDTEAVEIP RGELRRLIER THFSMAQHDV RYYLNGLLLE LTGSGARAVA TDGHRLALAE
SDSPVQVAQP RQVIVPRKGV QELLRLLDDA DEPATLEFGT NHVRVTLQSV RLTSKLIDGV
FPDYNRVIPQ DGDKHVLIDR QYLRQALTRV AILSNEKYRG IRFAVEGDTL RIGSHNPEQE
EAEEELGIEY GGEAVELGFN ANYLLDALGA LDTERVQVTL TDASSSGLIR AEGSDNARYV
VMPMRL
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