Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1221 |
Symbol | |
ID | 4710419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1325277 |
End bp | 1327367 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855694 |
Product | glycine--tRNA ligase |
Protein accession | YP_001002798 |
Protein GI | 121998011 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC GCCGCCCCCT GCTCATCGAG ATCGGGACCG AGGAGCTGCC CCCCAAGGCC CTGCAGCGGC TGATGATCGC CTTCCGGAAC GACCTGGCCA GCGCGCTCGA GGAGCAGCGC CTGCAGCCCG TGGGCGTTCA GGCATTCGCC ACGCCGCGCC GGCTGGCCGT GCGGTTCGAG GGCGTGGACA CCCGCCAGGC CGATGAACAG ATCGAGCGTC TCGGGCCCAA GGTCGAGGCC GCTTACGACG CCGCAGGGCA GGCCACCAAG GCCGCCGAGG GGTTCGCCCG CTCCTGCGGC GTCGATGTCG ATGCGCTCGA CAGCGTGGAG ACCGACAAGG GCCCGCGTCT GGTATGGCGG GGGGTCCAGC CCGGCGAGGC CACCGAGACG ATCCTCCCCG GGCTGGTGGA GGCAGCGCTA GGCCGGCTCC CGATCCCTAA GCGCATGCGC TGGGGTAGCG GTGAGGTGGA GTTCGTGCGC CCCGTGCACT GGACAGTGGC CCTGCTCGGT GAACAGGTGA TCCCCGGTAC CATCCTCGGC ATCCCCACCG GGCGGATCAC CTACGGGCAC CGCTTCCACG GACGCGGCCG CAGGGGCATC GAGATCCCTG AGCCGGGCGC CTACGAGCGG CTTCTGGAGG AGCAGGGACA TGTGGTGGCT GACTTTGTCG AACGCCGGCG CCGCGTCGAG ACCGGCGTCC GCCAGGAGGC AGAGCGTGCC GGCGGCGTGC CGGTGGGCGA GGAGGCACTG TTCGACGAGG TCACCGGGCT GGTCGAGTGG CCGGTGGCAC TCTCCGGCGA CTTCGACCAA CGCTTCCTGA AGATCCCCGA GGAGGCGCTG ATCTCCAGCA TGCAGGGCCA CCAGCGCTGC TTTCCCGTCC GCGGCACCGA CGGCCAGCTG CTGGCGCGCT TCATCACCGT CGCCAACATC GAGAGCCAAG ATCCCCAGCA GGTCCGTCAC GGTAACGAGC GCGTGATCCG TCCGCGCCTG GCCGACGCCG AGTTCTTCTG GCAGCAGGAT CGCCGCCTGG CCTTGGGCGA ACGGCTCGAG CAGCTGCGTC AGGTGGTCTT CCACCGTAGC CTGGGCGATC TGCACGCGCG CAGCCAGCGG ATCAGCCGCC TGGCAGGCTT GGTGACCGAA CGGATCGGGG CGGACGTTGA GGCAGCCCGC CGGGCCGGAT TGCTAGCCAA GTGCGATCTG GTCACCGAGA TGGTCGACGA ATTTCCCGAG CTACAGGGGA TCATGGGCGG TCACTACGCC CGCGCCGACG GCGAGGGCGA CGCGGTGGCT GCGGCCATCG CCGCCCACTA TCGACCGGCC TACGCCGGGG ATGCACTGCC TGAGACTCCG GAGGGGCAGG CGGTCAGTAT CGCCGATCGC ATCGATACGC TGGTCGGGAT CTTCGCCGCC GACGGCGCCC CCTCGGCGGA CAAGGACCCG TTCGGGCTGC GGCGGGCCGC CATCGGTCTG CTGCGCTGCC TGATCGAGGG CGGCCACGAT CTGTCGCTGC GCGAATTCCT CGATACCGCA GCCGGGATGA TCGCCGACGA GTGCGGCGTG AGCACCGAAG GCATCGCCGA ACAGGTTGCC GCTTTCTGTC ACGAGCGGCT GCGCGGCTAC TATGCCGAGC GCGGCTACGC CGCCGAGGTC TTCGAAGCGG TGGCAGCGGT GGCTCCGTCG TCGCCCCTCG ATTTCCACCG CCGCCTGGTG GCGTGCTCGA CGTTCCGCGA GCGCAGCGAG GCGCAGACGC TCGGGGAGGC GAATAAGCGC ATTGGCAACA TCCTGCGCCG TGCCGAGGTC GACCCGCAGA CCCGGCCCGA GGCCGTCGAG GCGGACGGCG AGGCCGCCGA GCGGGCACTG GCCGAGGCGC TGCGCGAGGC GTGGTCGGTG GCAGGTCCTC GGATCGACCG CGGCGAATAC GATGCCGCCC TCACGGCGCT GGCAGAGTTG CACGGGCCGG TGGACCGCTT CTTCACCGAC GTTATGGTGA TGGCCGAGGA TGAAGCTGTC CGCCAACGCC GGCTGGAACT CCTCGGAGCC GTCCGTCACG CCTTCCGCGC CGTGGCGGAC CTCTCCCACC TGCCGGGCTG A
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Protein sequence | MAERRPLLIE IGTEELPPKA LQRLMIAFRN DLASALEEQR LQPVGVQAFA TPRRLAVRFE GVDTRQADEQ IERLGPKVEA AYDAAGQATK AAEGFARSCG VDVDALDSVE TDKGPRLVWR GVQPGEATET ILPGLVEAAL GRLPIPKRMR WGSGEVEFVR PVHWTVALLG EQVIPGTILG IPTGRITYGH RFHGRGRRGI EIPEPGAYER LLEEQGHVVA DFVERRRRVE TGVRQEAERA GGVPVGEEAL FDEVTGLVEW PVALSGDFDQ RFLKIPEEAL ISSMQGHQRC FPVRGTDGQL LARFITVANI ESQDPQQVRH GNERVIRPRL ADAEFFWQQD RRLALGERLE QLRQVVFHRS LGDLHARSQR ISRLAGLVTE RIGADVEAAR RAGLLAKCDL VTEMVDEFPE LQGIMGGHYA RADGEGDAVA AAIAAHYRPA YAGDALPETP EGQAVSIADR IDTLVGIFAA DGAPSADKDP FGLRRAAIGL LRCLIEGGHD LSLREFLDTA AGMIADECGV STEGIAEQVA AFCHERLRGY YAERGYAAEV FEAVAAVAPS SPLDFHRRLV ACSTFRERSE AQTLGEANKR IGNILRRAEV DPQTRPEAVE ADGEAAERAL AEALREAWSV AGPRIDRGEY DAALTALAEL HGPVDRFFTD VMVMAEDEAV RQRRLELLGA VRHAFRAVAD LSHLPG
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