Gene Hhal_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1208 
Symbol 
ID4710390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1312826 
End bp1313392 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content71% 
IMG OID639855681 
ProductDJ-1 family protein 
Protein accessionYP_001002785 
Protein GI121997998 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGTG TACGAGTTCT GGTTCCGCTG GCCCACGGCT GTGAGGAGCT GGAGGCGGTC 
ACGGTGATCG ACCTGCTGCG TCGGGCCGGT GCCGAGGTGG TGGTCGCCGG CCTGGAATCG
GGCACGGTGC GCGCCAGCCG CGGGGTTCAA CTGGTCCCGG ATACCGAGCT GGACAGGGTC
GTGGAGGAGA CCTTCGACCT GATCGTGCTG CCCGGCGGGC TCGGCGGCGC CGAGCGGCTC
GAGGGGGATG CGCGCATCGC CCGCATGCTG CAGGCGCAGA ACGAGCGCGG CGGCTGGATC
GCCGCCATCT GCGCAGCGCC GCGTGTGCTC GCCGAGGTAG GGGTCCTGCA GGGGCGTCGC
GCCACCGCCT TCCCCACGCA GCTCGAGCGC CACGGCATCG AGCCGGAGGA CAGCGCGGTG
GTGATCGACG ACAACCTGAT CACCTCGCGC GGGCCGGGCA CAGCGATGGA CTTTGCCCTG
CGCCTGATCG AGGTGGTCTA CGGCGACGAG AAGGCTGCGG AGGTCGAGGG GGCCCTGCAA
CGCCCGCTGT CCCACCAGCG CTACTGA
 
Protein sequence
MMSVRVLVPL AHGCEELEAV TVIDLLRRAG AEVVVAGLES GTVRASRGVQ LVPDTELDRV 
VEETFDLIVL PGGLGGAERL EGDARIARML QAQNERGGWI AAICAAPRVL AEVGVLQGRR
ATAFPTQLER HGIEPEDSAV VIDDNLITSR GPGTAMDFAL RLIEVVYGDE KAAEVEGALQ
RPLSHQRY