| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1203 |
|---|
| Symbol | |
|---|
| ID | 4710371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1307873 |
|---|
| End bp | 1308427 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855676 |
|---|
| Product | ATP-dependent protease peptidase subunit |
|---|
| Protein accession | YP_001002780 |
|---|
| Protein GI | 121997993 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAACAC TGCACGGCAC CACCATCCTC GCCGTCCGCC GGGAGGGCCA AGTCGCCCTT
GGCGGAGACG GGCAGGTCAC CCTCGGGCAC ACGGTGCTCA AGGGCAACGC GCGCAAGGTC
CGCCGGCTCT ACCACGGACG AGTACTGGCG GGATTCGCCG GGGCCACCGC GGACGCCTTC
ACCCTGTTCG AGCGCTTCGA GGCGCAACTC GAGAAACACC ACGGTCAGCT GGCTCGCTCC
GCCGTCGAGC TGGCCAAGGA GTGGCGCTCC GATCGCGTCC TGCGCCGCCT GGAGGCCCTG
CTCGTCGTCG CCAACACCGA GTCTCTGCTA ACCCTCTCCG GGACGGGAGA CGTCATCGAG
CCCGAGCACG ACCTGATGGC CGTCGGTTCC GGCGGGCCGT ACGCCCAGGC CGCCGGCCGG
GCGCTGCTCG AATCCACCGA CCTGCCCGCC GACCAGATCA CCCAACGGGC GCTGGAGATC
GCCGGCGACA TCTGCGTCTA TACCAACCGC CACATCACTG TGGAGACGCT GCCCGAGACC
CGTGAGGAGT CGTAA
|
|---|
| Protein sequence | METLHGTTIL AVRREGQVAL GGDGQVTLGH TVLKGNARKV RRLYHGRVLA GFAGATADAF
TLFERFEAQL EKHHGQLARS AVELAKEWRS DRVLRRLEAL LVVANTESLL TLSGTGDVIE
PEHDLMAVGS GGPYAQAAGR ALLESTDLPA DQITQRALEI AGDICVYTNR HITVETLPET
REES
|
|---|
| |