Gene Hhal_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1196 
Symbol 
ID4710538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp1301180 
End bp1301740 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content69% 
IMG OID639855669 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001002773 
Protein GI121997986 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.484083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCAGTG GCCCCTACAC CCTCGATCCC CAGACCGGGT TCCTCCACCC GGTTCGTCAC 
TGTCCATCGC CGAACCACGG CCCGCGTCCG CCCGGCTGCG CCGTCGACCT CTTGGTCATC 
CACGCCATCA GTCTGCCCCC CGGGGAGTTC GGCGGTGGTT GGATCGACTG CCTGTTCACC 
AACCGCCTCG ATCCACAGGC CCACCCCGCC TTCGCACCGA TCGCCGATCT GCGCGTCTCG 
GCGCACCTGC TCATCGACCG GGGGGGCGCC GTCACCCAAT ACGTGCCGTT CCATCGCCGG 
GCGTGGCACG CCGGCCGGTC GGCCTTCGGA GGGCGCACGG AGTGTAATGA CTTCTCGGTA 
GGAATCGAGC TGGAAGGGGA TGAGCAGACA CCGTACCCAG AGCCCCAGTA CACGAGCCTG 
ATCCAGGTGG TGCGGACCCT GCGCCGCCAC TACCCGAAAA TCACACCGAG CCGCATCGTC 
GGCCACAGCG ACATCGCCCC CGACCGCAAG ACCGACCCGG GCCCGGCCTT CGACTGGCCG 
CGGCTGCTAG AGGCGCTCTG A
 
Protein sequence
MSSGPYTLDP QTGFLHPVRH CPSPNHGPRP PGCAVDLLVI HAISLPPGEF GGGWIDCLFT 
NRLDPQAHPA FAPIADLRVS AHLLIDRGGA VTQYVPFHRR AWHAGRSAFG GRTECNDFSV 
GIELEGDEQT PYPEPQYTSL IQVVRTLRRH YPKITPSRIV GHSDIAPDRK TDPGPAFDWP 
RLLEAL