Gene Hhal_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1170 
Symbol 
ID4710163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1276981 
End bp1278354 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content69% 
IMG OID639855643 
Producthypothetical protein 
Protein accessionYP_001002747 
Protein GI121997960 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG GTAAGGACGA GCGGCGCAGC CGCGCCGTGC CCAGCAGTCG GTGGGGCCGC 
CTCTATCACC TGGGGCGGGC CACCGGGGAC CTGGCCCTGG GGATCGGCTG GAACGGCCTG
CGTGAACTGA GCAGCGGTGA AGAAGGGCAG GGCCGCATCG AGCTCTCGCC TGCGCACGCA
CGACGGATCA CCGAACGGCT CGGGCGGATG CGTGGCGCCG TCATGAAGAT GGGCCAGCTG
ATGTCGATGG ATGGCACCGA CATCCTCGCC CCCGAGGTTG CCGAGATCAT GGGCGCGCTG
CGCCACGAGG CCGACCCGAT GCCACTGAGC CAGCTCGACA GCGTGCTGCG CCGCGAGCTC
GGCAAGGGAT GGCTGAAGCG CTTCCGGGAG TTCGACTTCA CGCCCATCGC CGCCGCCTCC
ATCGGCCAGG TACACCGGGC GGTTGCAGCC GATGGCCGTG AGTTGGCGAT GAAGATTCAG
TTCCCCGGGG TGCGGGAGAG CATCGACAGC GACCTGGACA ACCTCGGATT CGTGTTCCGC
CACGGCGGCA TCATGCCCCG CGGCCTGCGG ATCGAGAACC TGCTCGACGA GGCACGGCAA
CAGCTCCACC GGGAGGCCGA CTACGAGGCC GAGGCGGATG CATTGGAGGC TTACGGTCGA
GCGCTTGGGG ACGACCCGGA GATCGTTCTG CCGGGGGTCC ACCGGGACCT GTCCACCCCC
CGGGTACTCG CCATGGACTA CGTCCACGGC ACGCCGATCG ACCAGCTGGC CGACCGGGGC
GGGGAGGCCG CCGCGCTGCG CGACCACGCG GCCTCCCTGC TCAGCCGCCT CGCGCTCCGC
GAGCTGTTCG AATTCCGATT GGTACAGACC GACCCCAATT TCAGCAACTT CCTCTACGAC
GCCGGGCAGG GCCGCGTGGT GCTACTCGAT TTCGGTGCCA CGCATTCGGT GCGCCCGGAA
CTGGTGGAGA TCTATCGACG CCTGGGACGC GCCGCCCGGG ATCGGGATCG TGACAGCCTC
GAGGCGTGCG CGCGGGAACT AGGCTACCTG GAGCCGGAGG CCTCGGCCGA GCAAGTCGGC
TCGCTGCTGG AACTGCTGGA GATGACCAGC GAACCGCTGC GTCACCCCGG CGCATACGAC
TTCGGCGCCT CGGATCTGTT CGAGCGGGTC TACCACCGGG GGCGGACCAT GTTCTTCAGC
GACCGCTTTG CCGGCACACC GGCGTCGGAC ACGCTGTTTC TGCACCGCAA GTTCATGGGT
ATCTTCATGC TCTGCCGGCG CCTACAGGCG CGTGTCGATC TACAAGGACT GATCGACCCC
TACCTGACGG CCGCCCCCGG CGCCGCAGCG CCGGGAACCA CCGCCCCCGG CTAG
 
Protein sequence
MTRGKDERRS RAVPSSRWGR LYHLGRATGD LALGIGWNGL RELSSGEEGQ GRIELSPAHA 
RRITERLGRM RGAVMKMGQL MSMDGTDILA PEVAEIMGAL RHEADPMPLS QLDSVLRREL
GKGWLKRFRE FDFTPIAAAS IGQVHRAVAA DGRELAMKIQ FPGVRESIDS DLDNLGFVFR
HGGIMPRGLR IENLLDEARQ QLHREADYEA EADALEAYGR ALGDDPEIVL PGVHRDLSTP
RVLAMDYVHG TPIDQLADRG GEAAALRDHA ASLLSRLALR ELFEFRLVQT DPNFSNFLYD
AGQGRVVLLD FGATHSVRPE LVEIYRRLGR AARDRDRDSL EACARELGYL EPEASAEQVG
SLLELLEMTS EPLRHPGAYD FGASDLFERV YHRGRTMFFS DRFAGTPASD TLFLHRKFMG
IFMLCRRLQA RVDLQGLIDP YLTAAPGAAA PGTTAPG